RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 ZDHHC20Q5W0Z9 365 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 KDELC1Q6UW63 502 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 ARHGEF18Q6ZSZ5 1173 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 GLT6D1Q7Z4J2 308 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 TMC3Q7Z5M5 1100 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 CACNA2D3Q8IZS8 1091 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 BMPERQ8N8U9 685 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 OXNAD1Q96HP4 312 aaPredicted RBP12.75□□□□□ -0.37
TREX1-203ENST00000456089 MRGPRX2Q96LB1 330 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 SPATA13Q96N96 652 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 HERPUD2Q9BSE4 406 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 SLC12A9Q9BXP2 914 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 FAM117AQ9C073 453 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 GRPEL1Q9HAV7 217 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 BPIFA1Q9NP55 256 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 KLC4Q9NSK0 619 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 SCHIP1Q9P0W5 487 aaPredicted RBP12.75□□□□□ -0.37
TREX1-203ENST00000456089 SLC23A2Q9UGH3 650 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 PKP3Q9Y446 797 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 SPO11Q9Y5K1 396 aa12.75□□□□□ -0.37
TREX1-203ENST00000456089 NUAK1O60285 661 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 RAD1O60671 282 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 ITGB2P05107 769 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 F3P13726 295 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 PSMB4P28070 264 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 ATP1A2P50993 1020 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 GFERP55789 205 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 CLPPQ16740 277 aaPredicted RBP12.74□□□□□ -0.37
TREX1-203ENST00000456089 KHDC1Q4VXA5 237 aaKnown RBP12.74□□□□□ -0.37
TREX1-203ENST00000456089 PDPK2PQ6A1A2 396 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 ADGRG6Q86SQ4 1221 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 PHYKPLQ8IUZ5 450 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 UNC5BQ8IZJ1 945 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 TRAM1L1Q8N609 369 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 GDAP1Q8TB36 358 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 CCDC110Q8TBZ0 833 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 FICDQ9BVA6 458 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 RMI1Q9H9A7 625 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 SARS2Q9NP81 518 aaKnown RBP12.74□□□□□ -0.37
TREX1-203ENST00000456089 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.74□□□□□ -0.37
TREX1-203ENST00000456089 CPNE7Q9UBL6 633 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 DNAJC16Q9Y2G8 782 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 PCDHGA3Q9Y5H0 932 aa12.74□□□□□ -0.37
TREX1-203ENST00000456089 HEMK1Q9Y5R4 338 aaPredicted RBP12.74□□□□□ -0.37
TREX1-203ENST00000456089 TLN1Q9Y490 2541 aaKnown RBP12.73□□□□□ -0.37
TREX1-203ENST00000456089 C2orf81A6NN90 581 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 AGTP01019 485 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 BPIP17213 487 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 TYRP1P17643 537 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 HMGCLP35914 325 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 CHRNA4P43681 627 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 GTF2H3Q13889 308 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 INSCQ1MX18 579 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 DCAF12Q5T6F0 453 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 TIPARPQ7Z3E1 657 aaKnown RBP12.73□□□□□ -0.37
TREX1-203ENST00000456089 ARHGAP22Q7Z5H3 698 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 SLC9B2Q86UD5 537 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 FAM71DQ8N9W8 422 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 TRIM58Q8NG06 486 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 RTP4Q96DX8 246 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 TTC25Q96NG3 672 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 PLEKHG4BQ96PX9 1271 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 DPYSL5Q9BPU6 564 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 DDA1Q9BW61 102 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 B3GNT4Q9C0J1 378 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 CARD9Q9H257 536 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 TRIM39Q9HCM9 518 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 OGFRQ9NZT2 677 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 PDP2Q9P2J9 529 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 TMPRSS11EQ9UL52 423 aa12.73□□□□□ -0.37
TREX1-203ENST00000456089 LOC101059948A0A1B0GTJ6 334 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 C5orf60A6NFR6 353 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 B4E171 279 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 STX7O15400 261 aaKnown RBP12.72□□□□□ -0.37
TREX1-203ENST00000456089 GPR39O43194 453 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 PPFIA2O75334 1257 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 PRKAR1AP10644 381 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 RPL10P27635 214 aaKnown RBP12.72□□□□□ -0.37
TREX1-203ENST00000456089 SPAM1P38567 509 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 TSPAN7P41732 249 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 DRG2P55039 364 aaKnown RBP12.72□□□□□ -0.37
TREX1-203ENST00000456089 MC2RQ01718 297 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 PARP6Q2NL67 630 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 P3H1Q32P28 736 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 WDR74Q6RFH5 385 aaPredicted RBP12.72□□□□□ -0.37
TREX1-203ENST00000456089 ZNF662Q6ZS27 426 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 GLYATL1Q969I3 302 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 TBL1YQ9BQ87 522 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 APOL2Q9BQE5 337 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 TMEM121Q9BTD3 319 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 FRMD8P1Q9BZ68 369 aaPredicted RBP12.72□□□□□ -0.37
TREX1-203ENST00000456089 STN1Q9H668 368 aaKnown RBP12.72□□□□□ -0.37
TREX1-203ENST00000456089 STARD5Q9NSY2 213 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 ZNF624Q9P2J8 865 aaPredicted RBP12.72□□□□□ -0.37
TREX1-203ENST00000456089 NFKBIL1Q9UBC1 381 aaPredicted RBP12.72□□□□□ -0.37
TREX1-203ENST00000456089 PILRAQ9UKJ1 303 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 ZNF148Q9UQR1 794 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 SLC30A1Q9Y6M5 507 aa12.72□□□□□ -0.37
TREX1-203ENST00000456089 KIR2DS5A0A0G2JLQ3 304 aa12.71□□□□□ -0.37
TREX1-203ENST00000456089 A0A0G2JNG1 304 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms