RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 SLCO3A1Q9UIG8 710 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 CLEC4EQ9ULY5 219 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 DHRS12A0PJE2 317 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 RAD51BO15315 384 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 ATP6V1B2P21281 511 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 ATP6V0D1P61421 351 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 RING1Q06587 406 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 RFLNAQ6ZTI6 216 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 RETREG3Q86VR2 466 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 FUBP1Q96AE4 644 aaKnown RBP11.84□□□□□ -0.51
SMPD4-213ENST00000454468 NLE1Q9NVX2 485 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-213ENST00000454468 PCDHGA7Q9Y5G6 932 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 U3KQV3 271 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 PRR23AA6NEV1 266 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 CACNG3O60359 315 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 KERAO60938 352 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 CTSOP43234 321 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 DNAJB13P59910 316 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 ZNF648Q5T619 568 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 TTC33Q6PID6 262 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 RBM44Q6ZP01 1051 aaKnown RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 FAM47BQ8NA70 645 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 KIAA1191Q96A73 305 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 NSMCE3Q96MG7 304 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 TRIM15Q9C019 465 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 ING2Q9H160 280 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 RHBDL2Q9NX52 303 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 F5P12259 2224 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 GLYATL1P3A0A0U1RQE8 302 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 WASH4PA8MWX3 477 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 TRIM24O15164 1050 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 SH3BP5O60239 455 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 VNN2O95498 520 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 IGSF6O95976 241 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 OGNP20774 298 aaKnown RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 SERPINA4P29622 427 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 FAM189BP81408 668 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 LIPEQ05469 1076 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 ABRQ12979 859 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 PTGR1Q14914 329 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 FBXL19Q6PCT2 694 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 GCNT7Q6ZNI0 430 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 ADGRG2Q8IZP9 1017 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 SCML4Q8N228 414 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 CPSF7Q8N684 471 aaKnown RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 CATSPER1Q8NEC5 780 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 FAM126AQ9BYI3 521 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 CCDC90BQ9GZT6 254 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 TFB2MQ9H5Q4 396 aaKnown RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 SPG21Q9NZD8 308 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 LMCD1Q9NZU5 365 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 TEX28O15482 410 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 CST5P28325 142 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 ACBD5Q5T8D3 534 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 Q6ZVU0 165 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 DRAXINQ8NBI3 349 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 SLAIN1Q8ND83 568 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 CYB5D2Q8WUJ1 264 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 PHF12Q96QT6 1004 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 NR1H4Q96RI1 486 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 MGME1Q9BQP7 344 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 DPY30Q9C005 99 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 MEAF6Q9HAF1 191 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 ZNF334Q9HCZ1 680 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 INTS7Q9NVH2 962 aaKnown RBP11.83□□□□□ -0.52
SMPD4-213ENST00000454468 HCFC1R1Q9NWW0 138 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 LIMD1Q9UGP4 676 aa11.83□□□□□ -0.52
SMPD4-213ENST00000454468 BCAS2O75934 225 aaPredicted RBP11.82□□□□□ -0.52
SMPD4-213ENST00000454468 C8AP07357 584 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 G6PDP11413 515 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 FASP25445 335 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 CD70P32970 193 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 POLR2JP52435 117 aaKnown RBP11.82□□□□□ -0.52
SMPD4-213ENST00000454468 MAP7Q14244 749 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 LIN52Q52LA3 116 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 STK32CQ86UX6 486 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 C2orf73Q8N5S3 287 aaPredicted RBP11.82□□□□□ -0.52
SMPD4-213ENST00000454468 OR4F6Q8NGB9 312 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 SCAMP4Q969E2 229 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 SDCCAG3Q96C92 435 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 TEX37Q96LM6 180 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 ELOVL6Q9H5J4 265 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 ATP13A3Q9H7F0 1226 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 PKD2L2Q9NZM6 624 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 LCHNA4D1U4 455 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 H3BNX3 289 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 KPNA3O00505 521 aaPredicted RBP11.82□□□□□ -0.52
SMPD4-213ENST00000454468 FFAR2O15552 330 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 RFPL2O75678 378 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 PRLP01236 227 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 IDO1P14902 403 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 CDKL1Q00532 357 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 GTF2H2Q13888 395 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 TBC1D25Q3MII6 688 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 FAM26DQ5JW98 314 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 AFMIDQ63HM1 303 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 TMEM214Q6NUQ4 689 aaKnown RBP11.82□□□□□ -0.52
SMPD4-213ENST00000454468 GTF2H2CQ6P1K8 395 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 SLC22A15Q8IZD6 547 aa11.82□□□□□ -0.52
SMPD4-213ENST00000454468 BEND7Q8N7W2 519 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms