RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 KCNJ13O60928 360 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 POP7O75817 140 aaKnown RBP27.55■■■□□ 2
SMARCC1-203ENST00000454240 ANKRD20A4Q4UJ75 823 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 BCL7AQ4VC05 210 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 MSS51Q4VC12 460 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 FASTKD1Q53R41 847 aaKnown RBP27.55■■■□□ 2
SMARCC1-203ENST00000454240 KIAA0930Q6ICG6 404 aaPredicted RBP27.55■■■□□ 2
SMARCC1-203ENST00000454240 GUSBP11Q6P575 273 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 NAGSQ8N159 534 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 PNPLA1Q8N8W4 532 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 BBOF1Q8ND07 529 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 NAT14Q8WUY8 206 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 FCRL3Q96P31 734 aaPredicted RBP27.55■■■□□ 2
SMARCC1-203ENST00000454240 CATSPERZQ9NTU4 200 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 WHRNQ9P202 907 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 TBC1D29Q9UFV1 150 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 RP1P56715 2156 aa27.55■■■□□ 2
SMARCC1-203ENST00000454240 CACNA1AO00555 2505 aa27.54■■■□□ 2
SMARCC1-203ENST00000454240 RFPL3O75679 317 aa27.54■■■□□ 2
SMARCC1-203ENST00000454240 VAPBO95292 243 aa27.54■■■□□ 2
SMARCC1-203ENST00000454240 EML2O95834 649 aa27.54■■■□□ 2
SMARCC1-203ENST00000454240 ARCN1P48444 511 aaKnown RBP27.54■■■□□ 2
SMARCC1-203ENST00000454240 DHX9Q08211 1270 aaKnown RBP27.54■■■□□ 2
SMARCC1-203ENST00000454240 DMPKQ09013 629 aa27.54■■■□□ 2
SMARCC1-203ENST00000454240 HLTFQ14527 1009 aaKnown RBP eCLIP27.54■■■□□ 2
SMARCC1-203ENST00000454240 SEMA3AQ14563 771 aa27.54■■■□□ 2
SMARCC1-203ENST00000454240 C14orf28Q4W4Y0 310 aa27.54■■■□□ 2
SMARCC1-203ENST00000454240 PACS1Q6VY07 963 aa27.54■■■□□ 2
SMARCC1-203ENST00000454240 AMZ2Q86W34 360 aa27.54■■■□□ 2
SMARCC1-203ENST00000454240 BEND7Q8N7W2 519 aaPredicted RBP27.54■■■□□ 2
SMARCC1-203ENST00000454240 LINC00615Q96LM1 132 aaPredicted RBP27.54■■■□□ 2
SMARCC1-203ENST00000454240 TTC1Q99614 292 aa27.54■■■□□ 2
SMARCC1-203ENST00000454240 MAD1L1Q9Y6D9 718 aa27.54■■■□□ 2
SMARCC1-203ENST00000454240 RPS6KL1Q9Y6S9 549 aa27.54■■■□□ 2
SMARCC1-203ENST00000454240 A6NCN8 305 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 CD3EAPO15446 510 aaKnown RBP27.53■■■□□ 2
SMARCC1-203ENST00000454240 GP1BAP07359 652 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 PAMP19021 973 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 NSG1P42857 185 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 PRLHRP49683 370 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 DNAJC21Q5F1R6 531 aaKnown RBP27.53■■■□□ 2
SMARCC1-203ENST00000454240 PDIK1LQ8N165 341 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 MNS1Q8NEH6 495 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 OR6C4Q8NGE1 309 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 IFI44Q8TCB0 444 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 ADAMTS14Q8WXS8 1223 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 NAT6Q93015 286 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 STAMBPL1Q96FJ0 436 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 PWWP2AQ96N64 755 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 DPH5Q9H2P9 285 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 MARCH4Q9P2E8 410 aaPredicted RBP27.53■■■□□ 2
SMARCC1-203ENST00000454240 UTP11Q9Y3A2 253 aaKnown RBP27.53■■■□□ 2
SMARCC1-203ENST00000454240 PTPRBP23467 1997 aa27.53■■■□□ 2
SMARCC1-203ENST00000454240 ZCWPW2A0A1B0GU75 182 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 CPED1A4D0V7 1026 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 USP1O94782 785 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 TRIM16O95361 564 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 CDK4P11802 303 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 VCLP18206 1134 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 CBLBQ13191 982 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 AARS2Q5JTZ9 985 aaKnown RBP27.52■■■□□ 2
SMARCC1-203ENST00000454240 EFL1Q7Z2Z2 1120 aaKnown RBP27.52■■■□□ 2
SMARCC1-203ENST00000454240 MMGT1Q8N4V1 131 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 CLDN19Q8N6F1 224 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 PATE1Q8WXA2 126 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 ZNF669Q96BR6 464 aaPredicted RBP27.52■■■□□ 2
SMARCC1-203ENST00000454240 EBNA1BP2Q99848 306 aaKnown RBP27.52■■■□□ 2
SMARCC1-203ENST00000454240 RAB17Q9H0T7 212 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 GRHL1Q9NZI5 618 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 DNAJC16Q9Y2G8 782 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 SPTBN2O15020 2390 aa27.52■■■□□ 2
SMARCC1-203ENST00000454240 KLHL33A6NCF5 533 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 BANF1O75531 89 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 AP2A2O94973 939 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 ADRB1P08588 477 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 F3P13726 295 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 PPARGP37231 505 aaPredicted RBP27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 CALCOCO2Q13137 446 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 HIF1AQ16665 826 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 BBS9Q3SYG4 887 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 CCDC157Q569K6 752 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 PERM1Q5SV97 790 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 IYDQ6PHW0 289 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 ARL14Q8N4G2 192 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 NAT9Q9BTE0 207 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 LRRC1Q9BTT6 524 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 OSGEPL1Q9H4B0 414 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 PRDM8Q9NQV8 689 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 PRSS21Q9Y6M0 314 aa27.51■■□□□ 1.99
SMARCC1-203ENST00000454240 CTAGE15A4D2H0 777 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 MGAT4DA6NG13 374 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 SNX2O60749 519 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 CTAGE8P0CG41 777 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 GLB1P16278 677 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 TTPAP49638 278 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 DRG2P55039 364 aaKnown RBP27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 MAZP56270 477 aaKnown RBP27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 ARL4CP56559 192 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 E2F1Q01094 437 aa27.5■■□□□ 1.99
SMARCC1-203ENST00000454240 C8orf74Q6P047 294 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms