RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ZNF148Q9UQR1 794 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 MAB21L2Q9Y586 359 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 AP4B1Q9Y6B7 739 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 UBE4BO95155 1302 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 MYO3BQ8WXR4 1341 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 A0A0G2JLL6 359 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 LOC100506127A0A0U1RQW1 187 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF839A8K0R7 811 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 RSPH10B2B2RC85 870 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 K7EQM0 130 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 K7ERQ8 282 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF213O14771 459 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 NKX2-8O15522 239 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SELENOFO60613 162 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 B4GALT2O60909 372 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 NME6O75414 186 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 GPC4O75487 556 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 WBP4O75554 376 aaKnown RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 CTAG2O75638 210 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 NKX2-2O95096 273 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 LCATP04180 440 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 IVLP07476 585 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 ATXN1LP0C7T5 689 aaKnown RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 RSPH10BP0C881 870 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 TROVE2P10155 538 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 CLUP10909 449 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 IRF1P10914 325 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 ARSAP15289 507 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 GYPEP15421 78 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 RPA2P15927 270 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 PFKFB1P16118 471 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 IL7RP16871 459 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 CKMT2P17540 419 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 ATP6V1C1P21283 382 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 KCNA3P22001 575 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 CCND3P30281 292 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 LRPAP1P30533 357 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 OTX2P32243 289 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 PBX1P40424 430 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 MTNR1AP48039 350 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 GATMP50440 423 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 DGKEP52429 567 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SMSP52788 366 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLURP1P55000 103 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 AIF1P55008 147 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 MFAP3P55082 362 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDH13P55290 713 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 RPS8P62241 208 aaKnown RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 MRPS15P82914 257 aaKnown RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 DUSP2Q05923 314 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 PPP1R8Q12972 351 aaKnown RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 KLF10Q13118 480 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SEMA3BQ13214 749 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SRSF5Q13243 272 aaKnown RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 RRP1BQ14684 758 aaKnown RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 USP10Q14694 798 aaKnown RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLC18A3Q16572 532 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SYT16Q17RD7 645 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 Q3ZCU0 254 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 ARMC12Q5T9G4 340 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 STRIP1Q5VSL9 837 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SLFN13Q68D06 897 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 PMS2CLQ68D20 193 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 NAPEPLDQ6IQ20 393 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF529Q6P280 563 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 GLB1LQ6UWU2 654 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 C6orf89Q6UWU4 347 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM182Q6ZP80 229 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF551Q7Z340 670 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 PPP1R32Q7Z5V6 425 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 WDR5BQ86VZ2 330 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZDHHC21Q8IVQ6 265 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SYCE1Q8N0S2 351 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 LINC00482Q8N8I6 264 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 C11orf44Q8N8P7 122 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 CLEC1AQ8NC01 280 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 KCNH5Q8NCM2 988 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SETD9Q8NE22 299 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMIEQ8NEW7 156 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 TMEM185AQ8NFB2 350 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 OR2T3Q8NH03 318 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 OCC1Q8TAD7 63 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 IGDCC4Q8TDY8 1250 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 AZIN2Q96A70 460 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SPSB1Q96BD6 273 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 AP2M1Q96CW1 435 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 RASD2Q96D21 266 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 MTMR9Q96QG7 549 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 ZNF607Q96SK3 696 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SYT3Q9BQG1 590 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SPATA25Q9BR10 227 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 NDC1Q9BTX1 674 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 CDK19Q9BWU1 502 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 PKIBQ9C010 78 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 S1PR5Q9H228 398 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 FZD8Q9H461 694 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 SRD5A3Q9H8P0 318 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 PCDH18Q9HCL0 1135 aa4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 WDR6Q9NNW5 1121 aaKnown RBP4.39□□□□□ -1.71
HMGB3P21-201ENST00000452483 ASAH2Q9NR71 780 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms