RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ANKS6Q68DC2 871 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 DARS2Q6PI48 645 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 ABRAXAS1Q6UWZ7 409 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 FAM151BQ6UXP7 276 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 TMEM26Q6ZUK4 368 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 ARHGAP22Q7Z5H3 698 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 ZNF605Q86T29 641 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 KIAA1328Q86T90 577 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 CDKL3Q8IVW4 592 aaPredicted RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 IL22RA1Q8N6P7 574 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 PMEPA1Q969W9 287 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 TEFMQ96QE5 360 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 UCK1Q9HA47 277 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 SCHIP1Q9P0W5 487 aaPredicted RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 ZNF624Q9P2J8 865 aaPredicted RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 TMPRSS11EQ9UL52 423 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 AAR2Q9Y312 384 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 BSNQ9UPA5 3926 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 KCNN4O15554 427 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 PJA2O43164 708 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 UGT1A9O60656 530 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 KCNJ13O60928 360 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 AGTP01019 485 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 AMD1P17707 334 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 UGT1A6P19224 532 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 UGT1A1P22309 533 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 UGT1A4P22310 534 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 PTPN7P35236 360 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 UGT1A3P35503 534 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 SLC19A1P41440 591 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 HALP42357 657 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 VAV2P52735 878 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 DRG2P55039 364 aaKnown RBP12.68□□□□□ -0.38
CHD3-206ENST00000452447 CHRNA6Q15825 494 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 RAD9BQ6WBX8 426 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 AMZ2Q86W34 360 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 TXLNBQ8N3L3 684 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 ACRBPQ8NEB7 543 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 CXorf40BQ96DE9 158 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 BAG1Q99933 345 aaPredicted RBP12.68□□□□□ -0.38
CHD3-206ENST00000452447 ARHGAP9Q9BRR9 750 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 FICDQ9BVA6 458 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 LACRTQ9GZZ8 138 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 UGT1A7Q9HAW7 530 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 UGT1A10Q9HAW8 530 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 UGT1A8Q9HAW9 530 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 POT1Q9NUX5 634 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 TRIM10Q9UDY6 481 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 PCDHGA4Q9Y5G9 962 aa12.68□□□□□ -0.38
CHD3-206ENST00000452447 UBXN7O94888 489 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 TYRP1P17643 537 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 LPOP22079 712 aaPredicted RBP12.67□□□□□ -0.38
CHD3-206ENST00000452447 ARSDP51689 593 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 ANKRD20A2Q5SQ80 823 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 ANKRD20A1Q5TYW2 823 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 AGAP9Q5VTM2 703 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 ANKRD20A3Q5VUR7 823 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 CEACAM20Q6UY09 585 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 WASH2PQ6VEQ5 465 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 C11orf96Q7Z7L8 435 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 RBM12BQ8IXT5 1001 aaKnown RBP12.67□□□□□ -0.38
CHD3-206ENST00000452447 NKD1Q969G9 470 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 LRRC45Q96CN5 670 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 MED8Q96G25 268 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 PPP1R2P1Q96PQ5 205 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 FAM118BQ9BPY3 351 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 ZPBPQ9BS86 351 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 WASH6PQ9NQA3 447 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 AMFRQ9UKV5 643 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 REXO2Q9Y3B8 237 aaKnown RBP12.67□□□□□ -0.38
CHD3-206ENST00000452447 ARL5AQ9Y689 179 aa12.67□□□□□ -0.38
CHD3-206ENST00000452447 GOLGA6L9A6NEM1 432 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 C5orf60A6NFR6 353 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 PRR19A6NJB7 356 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 OR2AG2A6NM03 316 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 OR52A4PA6NMU1 304 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 GPR39O43194 453 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 POP7O75817 140 aaKnown RBP12.66□□□□□ -0.38
CHD3-206ENST00000452447 ZNF189O75820 626 aaPredicted RBP12.66□□□□□ -0.38
CHD3-206ENST00000452447 PRAMEF1O95521 474 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 ITGB2P05107 769 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 PYGMP11217 842 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 BRAFP15056 766 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 MSH3P20585 1137 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 PSMB4P28070 264 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 AKT1P31749 480 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 PDE1BQ01064 536 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 MC2RQ01718 297 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 KIF5AQ12840 1032 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 TAF1AQ15573 450 aaPredicted RBP12.66□□□□□ -0.38
CHD3-206ENST00000452447 LONRF2Q1L5Z9 754 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 GPRC6AQ5T6X5 926 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 TMEM220Q6QAJ8 160 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 RANBP10Q6VN20 620 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 PEX26Q7Z412 305 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 CACNA2D3Q8IZS8 1091 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 SYCE1Q8N0S2 351 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 UBL4BQ8N7F7 174 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 BMPERQ8N8U9 685 aa12.66□□□□□ -0.38
CHD3-206ENST00000452447 RASGEF1AQ8N9B8 481 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms