RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 PSMB4P28070 264 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 UGT1A3P35503 534 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 NAP1L1P55209 391 aaKnown RBP12.27□□□□□ -0.45
CPSF4-208ENST00000452047 RAB15P59190 212 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 EIF3EP60228 445 aaKnown RBP12.27□□□□□ -0.45
CPSF4-208ENST00000452047 C19orf57Q0VDD7 668 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 OLIG2Q13516 323 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 SEPT7Q16181 437 aaKnown RBP12.27□□□□□ -0.45
CPSF4-208ENST00000452047 ANKRD20A2Q5SQ80 823 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 ANKRD20A1Q5TYW2 823 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 AGAP9Q5VTM2 703 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 ANKRD20A3Q5VUR7 823 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 ITPRIPL1Q6GPH6 555 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 TMEM26Q6ZUK4 368 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 FAM129CQ86XR2 697 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 TRAPPC5Q8IUR0 188 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 KLHDC8BQ8IXV7 354 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 RASGEF1AQ8N9B8 481 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 CCDC112Q8NEF3 446 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 GDAP1Q8TB36 358 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 BRSK1Q8TDC3 778 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 NCSTNQ92542 709 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 SPATA13Q96N96 652 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 BAG1Q99933 345 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-208ENST00000452047 FAM118BQ9BPY3 351 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 FICDQ9BVA6 458 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 SEMA4CQ9C0C4 833 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 UGT1A7Q9HAW7 530 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 UGT1A10Q9HAW8 530 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 UGT1A8Q9HAW9 530 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 WDR70Q9NW82 654 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 TRIM10Q9UDY6 481 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 PKP3Q9Y446 797 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 PCDHGA4Q9Y5G9 962 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 ARL5AQ9Y689 179 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 SLC30A1Q9Y6M5 507 aa12.27□□□□□ -0.45
CPSF4-208ENST00000452047 A0A0U1RQJ8 604 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 OR52A4PA6NMU1 304 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 A8MU76 341 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 PDZK1P1A8MUH7 402 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 KCNN4O15554 427 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 TJP3O95049 919 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 VIPP01282 170 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 C9P02748 559 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 ANKRD34CP0C6C1 535 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 MAPK9P45984 424 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 PPM1FP49593 454 aaPredicted RBP12.26□□□□□ -0.45
CPSF4-208ENST00000452047 CTSCP53634 463 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 DMPKQ09013 629 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 MSLNQ13421 630 aaPredicted RBP12.26□□□□□ -0.45
CPSF4-208ENST00000452047 ITGA9Q13797 1035 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 GTF2H3Q13889 308 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 LY6DQ14210 128 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 PTPRCAPQ14761 206 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 SNAP47Q5SQN1 464 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 MANEAQ5SRI9 462 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 LDLRAP1Q5SW96 308 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 GPRC6AQ5T6X5 926 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 ANKS6Q68DC2 871 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 KIAA1328Q86T90 577 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 CCDC110Q8TBZ0 833 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 NKD1Q969G9 470 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 SGF29Q96ES7 293 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 APOL2Q9BQE5 337 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 FERMT1Q9BQL6 677 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 ASPSCR1Q9BZE9 553 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 ZCCHC2Q9C0B9 1178 aaKnown RBP12.26□□□□□ -0.45
CPSF4-208ENST00000452047 SLC40A1Q9NP59 571 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 POT1Q9NUX5 634 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 SLC39A1Q9NY26 324 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 WDR37Q9Y2I8 494 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 AAR2Q9Y312 384 aaKnown RBP12.26□□□□□ -0.45
CPSF4-208ENST00000452047 PCDHB11Q9Y5F2 797 aa12.26□□□□□ -0.45
CPSF4-208ENST00000452047 TLN1Q9Y490 2541 aaKnown RBP12.25□□□□□ -0.45
CPSF4-208ENST00000452047 STX7O15400 261 aaKnown RBP12.25□□□□□ -0.45
CPSF4-208ENST00000452047 UBXN7O94888 489 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 PRAMEF1O95521 474 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 VCLP18206 1134 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 LPOP22079 712 aaPredicted RBP12.25□□□□□ -0.45
CPSF4-208ENST00000452047 IDSP22304 550 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 DRG2P55039 364 aaKnown RBP12.25□□□□□ -0.45
CPSF4-208ENST00000452047 GFERP55789 205 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 MC2RQ01718 297 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 KLF1Q13351 362 aaPredicted RBP12.25□□□□□ -0.45
CPSF4-208ENST00000452047 CLCA4Q14CN2 919 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 TAF1AQ15573 450 aaPredicted RBP12.25□□□□□ -0.45
CPSF4-208ENST00000452047 DCAF12Q5T6F0 453 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 DENND5AQ6IQ26 1287 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 DARS2Q6PI48 645 aaKnown RBP12.25□□□□□ -0.45
CPSF4-208ENST00000452047 FAM83HQ6ZRV2 1179 aaPredicted RBP12.25□□□□□ -0.45
CPSF4-208ENST00000452047 PEX26Q7Z412 305 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 AMZ2Q86W34 360 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 PLXDC1Q8IUK5 500 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 TRIM48Q8IWZ4 208 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 OR4K2Q8NGD2 314 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 JPH3Q8WXH2 748 aaPredicted RBP12.25□□□□□ -0.45
CPSF4-208ENST00000452047 RTP4Q96DX8 246 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 TTC25Q96NG3 672 aa12.25□□□□□ -0.45
CPSF4-208ENST00000452047 TEFMQ96QE5 360 aaKnown RBP12.25□□□□□ -0.45
CPSF4-208ENST00000452047 DESI2Q9BSY9 194 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms