RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CYP1A1P04798 512 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 CDK1P06493 297 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 APRTP07741 180 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ETFAP13804 333 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 UBA1P22314 1058 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 CHRNA5P30532 468 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MAT2AP31153 395 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 SLC5A2P31639 672 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 HSD17B2P37059 387 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ELK3P41970 407 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 DPP6P42658 865 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 NR0B1P51843 470 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 MAPK10P53779 464 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 POU5F1BQ06416 359 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SLC1A5Q15758 541 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 KCNA10Q16322 511 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CYP2A13Q16696 494 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ASTE1Q2TB18 679 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 VPS26BQ4G0F5 336 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 KLHL22Q53GT1 634 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 DCAF6Q58WW2 860 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 FAM209AQ5JX71 171 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 LDLRAP1Q5SW96 308 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 UBXN11Q5T124 520 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PTRHD1Q6GMV3 140 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 UNC5AQ6ZN44 842 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 HIST2H3AQ71DI3 136 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ARMCX2Q7L311 632 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ADGRG3Q86Y34 549 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ZDHHC17Q8IUH5 632 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 GPIHBP1Q8IV16 184 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SEMA6DQ8NFY4 1073 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 OR14K1Q8NGZ2 314 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 NRG4Q8WWG1 115 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MAFIPQ8WZ33 124 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 THRSPQ92748 146 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 USP7Q93009 1102 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ARL11Q969Q4 196 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 C3orf49Q96BT1 292 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 PTERQ96BW5 349 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 CCDC17Q96LX7 622 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 KCTD7Q96MP8 289 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 RBM14Q96PK6 669 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 EYA3Q99504 573 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 VAT1Q99536 393 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 KLF6Q99612 283 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 C12orf57Q99622 126 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 TREX2Q9BQ50 279 aaPredicted RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 TTLL2Q9BWV7 592 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 AMNQ9BXJ7 453 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 NLNQ9BYT8 704 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MAN1C1Q9NR34 630 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 EIF2B3Q9NR50 452 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 HEBP1Q9NRV9 189 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 LYARQ9NX58 379 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 HCN3Q9P1Z3 774 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 LIMD1Q9UGP4 676 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SH3BGRL2Q9UJC5 107 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SCP2D1Q9UJQ7 156 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ADAMTS6Q9UKP5 1117 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SNX6Q9UNH7 406 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 SLC9A8Q9Y2E8 581 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 HRH3Q9Y5N1 445 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MYH7BA7E2Y1 1941 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 MAP2P11137 1827 aaKnown RBP2.19□□□□□ -2.06
USP53-202ENST00000450251 NWD2Q9ULI1 1742 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 IRS2Q9Y4H2 1338 aa2.19□□□□□ -2.06
USP53-202ENST00000450251 ASB14A6NK59 587 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SUPT3HB4E1H0 165 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 hCG_2039718K7EN88 272 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC28A1O00337 649 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 IRS4O14654 1257 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 HNRNPDLO14979 420 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 ADAMDEC1O15204 470 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CYP26A1O43174 497 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RGS14O43566 566 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LILRB5O75023 590 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GCATO75600 419 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 AKAP3O75969 853 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CSPG5O95196 566 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 C9P02748 559 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FTH1P02794 183 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GSTM1P09488 218 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CCNYL3P0C7X3 344 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SMIM18P0DKX4 95 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FOSL2P15408 326 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CSF2RAP15509 400 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CPN2P22792 545 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MZF1P28698 734 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 STAT3P40763 770 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MAGEA11P43364 429 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 KCNJ1P48048 391 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ERFP50548 548 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 APLP1P51693 650 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GPR143P51810 404 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TKTL1P51854 596 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CDH13P55290 713 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RAB8AP61006 207 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CXCR4P61073 352 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CAP1Q01518 475 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms