RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 COQ3Q9NZJ6 369 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 MARCH4Q9P2E8 410 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-204ENST00000449510 BOLA1Q9Y3E2 137 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 ELOVL7A1L3X0 281 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 TYW5A2RUC4 315 aaKnown RBP12.28□□□□□ -0.44
UBE3B-204ENST00000449510 NIPSNAP2O75323 286 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 ALDH1A2O94788 518 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 STBD1O95210 358 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 C1RP00736 705 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 PFKMP08237 780 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 G6PDP11413 515 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 SLC6A2P23975 617 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 GABRB3P28472 473 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 IL12RB1P42701 662 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 SLC26A2P50443 739 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 ATN1P54259 1190 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-204ENST00000449510 TBX4P57082 545 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 RPL26P61254 145 aaKnown RBP12.28□□□□□ -0.44
UBE3B-204ENST00000449510 SPCS2Q15005 226 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 KCNJ8Q15842 424 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 OVOS1Q6IE37 1185 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 Q6ZNX1 250 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 APOBEC3FQ8IUX4 373 aaKnown RBP12.28□□□□□ -0.44
UBE3B-204ENST00000449510 LGI2Q8N0V4 545 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 LSMEM2Q8N112 164 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 SIDT2Q8NBJ9 832 aaKnown RBP12.28□□□□□ -0.44
UBE3B-204ENST00000449510 ACDQ96AP0 544 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 SMARCD1Q96GM5 515 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 TRMOQ9BU70 441 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 MAGEL2Q9UJ55 1249 aa12.28□□□□□ -0.44
UBE3B-204ENST00000449510 WBP11Q9Y2W2 641 aaKnown RBP12.28□□□□□ -0.44
UBE3B-204ENST00000449510 CCDC162PA2VCL2 907 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 BBIP1A8MTZ0 92 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 KPNA5O15131 536 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 ABCB7O75027 752 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 CD68P34810 354 aaPredicted RBP12.27□□□□□ -0.44
UBE3B-204ENST00000449510 ARSDP51689 593 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 CRY1Q16526 586 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 C6orf141Q5SZD1 244 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 TSTD2Q5T7W7 516 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 SULT1C3Q6IMI6 304 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 HMBOX1Q6NT76 420 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 CLEC20AQ6ZU45 233 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 BTLAQ7Z6A9 289 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 CARM1Q86X55 608 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 FLCNQ8NFG4 579 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 FBXO32Q969P5 355 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 PLAC1Q9HBJ0 212 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 ZNF221Q9UK13 617 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 FBXW11Q9UKB1 542 aa12.27□□□□□ -0.44
UBE3B-204ENST00000449510 ZNF195O14628 629 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 ALOX5P09917 674 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 PRDX3P30048 256 aaKnown RBP12.27□□□□□ -0.45
UBE3B-204ENST00000449510 CD83Q01151 205 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 BOP1Q14137 746 aaKnown RBP12.27□□□□□ -0.45
UBE3B-204ENST00000449510 ANKRD34AQ69YU3 496 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 C11orf96Q7Z7L8 435 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 NDNFQ8TB73 568 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 RPL3LQ92901 407 aaKnown RBP12.27□□□□□ -0.45
UBE3B-204ENST00000449510 FEM1CQ96JP0 617 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 PANX1Q96RD7 426 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 TRIM54Q9BYV2 358 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 ITGB1BP2Q9UKP3 347 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 SATB2Q9UPW6 733 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 ERGIC3Q9Y282 383 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 LOC100130705A0A1B0GUX0 176 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 DFNA5O60443 496 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 SNX4O95219 450 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 DNTTP04053 509 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 SERPIND1P05546 499 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 RFC2P35250 354 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 POLD2P49005 469 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 HERVK_113P63132 956 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 LRP8Q14114 963 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 SLC39A12Q504Y0 691 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 STEAP4Q687X5 459 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 TTC30BQ8N4P2 665 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 ENKURQ8TC29 256 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 ERVK-6Q9BXR3 956 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 LRRC3Q9BY71 257 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 IPPKQ9H8X2 491 aa12.27□□□□□ -0.45
UBE3B-204ENST00000449510 GSTM1P09488 218 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 MZF1P28698 734 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 GRM5P41594 1212 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 DAOAP59103 153 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 ILF2Q12905 390 aaKnown RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 NEK5Q6P3R8 708 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 ENPP6Q6UWR7 440 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 PRR23CQ6ZRP0 262 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 ARMC8Q8IUR7 673 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 ZDHHC21Q8IVQ6 265 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 APOLD1Q96LR9 279 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 RBM4BQ9BQ04 359 aaKnown RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 RBM4Q9BWF3 364 aaKnown RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 TNFRSF12AQ9NP84 129 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 INTS10Q9NVR2 710 aaKnown RBP12.26□□□□□ -0.45
UBE3B-204ENST00000449510 OPTCQ9UBM4 332 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 TESMINQ9Y4I5 508 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 KIF13AQ9H1H9 1805 aa12.26□□□□□ -0.45
UBE3B-204ENST00000449510 DPYSL4O14531 572 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms