RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 FAM124AQ86V42 546 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 GPSM1Q86YR5 675 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 AFAP1L2Q8N4X5 818 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 CCNYL1Q8N7R7 359 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 RHEBL1Q8TAI7 183 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 EEF1AKMT1Q8WVE0 214 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 HMGB4Q8WW32 186 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 KIAA1191Q96A73 305 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 ZNF514Q96K75 400 aaPredicted RBP9.56□□□□□ -0.88
RFC4-210ENST00000449502 MRGPRX1Q96LB2 322 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 GPR78Q96P69 363 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 PLCD4Q9BRC7 762 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 TRIM54Q9BYV2 358 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 TRIM55Q9BYV6 548 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 BTBD1Q9H0C5 482 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 KDM4CQ9H3R0 1056 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 EML4Q9HC35 981 aaKnown RBP9.56□□□□□ -0.88
RFC4-210ENST00000449502 OXSMQ9NWU1 459 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 KLHL14Q9P2G3 628 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 THEGQ9P2T0 379 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 TSR3Q9UJK0 312 aaKnown RBP9.56□□□□□ -0.88
RFC4-210ENST00000449502 PRRC2BQ5JSZ5 2229 aaKnown RBP9.56□□□□□ -0.88
RFC4-210ENST00000449502 ATG2AQ2TAZ0 1938 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 CHD7Q9P2D1 2997 aa9.56□□□□□ -0.88
RFC4-210ENST00000449502 MYO18AQ92614 2054 aaKnown RBP9.55□□□□□ -0.88
RFC4-210ENST00000449502 CHD5Q8TDI0 1954 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 IGLV3-16A0A075B6K0 115 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 FAM170BA6NMN3 283 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 G3V2L1 256 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 EIF3FO00303 357 aaPredicted RBP9.55□□□□□ -0.88
RFC4-210ENST00000449502 EBAG9O00559 213 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 RAD51BO15315 384 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 ZBTB14O43829 449 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 VEGFDO43915 354 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 DLX3O60479 287 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 SNUPNO95149 360 aaKnown RBP9.55□□□□□ -0.88
RFC4-210ENST00000449502 WISP3O95389 354 aaPredicted RBP9.55□□□□□ -0.88
RFC4-210ENST00000449502 CHRNB1P11230 501 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 FGF3P11487 239 aaPredicted RBP9.55□□□□□ -0.88
RFC4-210ENST00000449502 NDUFV2P19404 249 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 PBLDP30039 288 aaPredicted RBP9.55□□□□□ -0.88
RFC4-210ENST00000449502 CA5AP35218 305 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 ADPRHP54922 357 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 DNAJB13P59910 316 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 ZP2Q05996 745 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 HSPA14Q0VDF9 509 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 SF3A3Q12874 501 aaKnown RBP eCLIP9.55□□□□□ -0.88
RFC4-210ENST00000449502 BOP1Q14137 746 aaKnown RBP9.55□□□□□ -0.88
RFC4-210ENST00000449502 PLEKHS1Q5SXH7 462 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 SEL1L3Q68CR1 1132 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 PNCKQ6P2M8 343 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 TMEM220Q6QAJ8 160 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 ADAMTSL4Q6UY14 1074 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 ZCCHC23Q6ZST2 131 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 ISCA2Q86U28 154 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 HORMAD1Q86X24 394 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 TRAPPC5Q8IUR0 188 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 WDR75Q8IWA0 830 aaKnown RBP9.55□□□□□ -0.88
RFC4-210ENST00000449502 UBALD2Q8IYN6 164 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 SIX5Q8N196 739 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 FBXO39Q8N4B4 442 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 TSTD1Q8NFU3 115 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 ASZ1Q8WWH4 475 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 ELMO1Q92556 727 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 TMEM159Q96B96 161 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 PDLIM5Q96HC4 596 aaKnown RBP9.55□□□□□ -0.88
RFC4-210ENST00000449502 HIC2Q96JB3 615 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 SEC16BQ96JE7 1060 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 C7orf26Q96N11 449 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 CCM2Q9BSQ5 444 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 FAM126AQ9BYI3 521 aaPredicted RBP9.55□□□□□ -0.88
RFC4-210ENST00000449502 OSBPL6Q9BZF3 934 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 SLC6A17Q9H1V8 727 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 WDR26Q9H7D7 661 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 SGK2Q9HBY8 427 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 TRIM39Q9HCM9 518 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 CYP4F12Q9HCS2 524 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 LTB4R2Q9NPC1 389 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 SLCO1B3Q9NPD5 702 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 PHPT1Q9NRX4 125 aaPredicted RBP9.55□□□□□ -0.88
RFC4-210ENST00000449502 NCKIPSDQ9NZQ3 722 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 CD274Q9NZQ7 290 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 GALPQ9UBC7 116 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 SERGEFQ9UGK8 458 aa9.55□□□□□ -0.88
RFC4-210ENST00000449502 KANSL1LA0AUZ9 987 aa9.54□□□□□ -0.88
RFC4-210ENST00000449502 ERICH4A6NGS2 130 aa9.54□□□□□ -0.88
RFC4-210ENST00000449502 OR2AG2A6NM03 316 aa9.54□□□□□ -0.88
RFC4-210ENST00000449502 CHURC1-FNTBB4DL54 471 aa9.54□□□□□ -0.88
RFC4-210ENST00000449502 CACNB4O00305 520 aaPredicted RBP9.54□□□□□ -0.88
RFC4-210ENST00000449502 SNX3O60493 162 aa9.54□□□□□ -0.88
RFC4-210ENST00000449502 IPO13O94829 963 aaKnown RBP9.54□□□□□ -0.88
RFC4-210ENST00000449502 PAK4O96013 591 aaPredicted RBP9.54□□□□□ -0.88
RFC4-210ENST00000449502 GSTM1P09488 218 aa9.54□□□□□ -0.88
RFC4-210ENST00000449502 HIST1H2AGP0C0S8 130 aaPredicted RBP9.54□□□□□ -0.88
RFC4-210ENST00000449502 GM2AP17900 193 aa9.54□□□□□ -0.88
RFC4-210ENST00000449502 HIST1H2ADP20671 130 aa9.54□□□□□ -0.88
RFC4-210ENST00000449502 TARSP26639 723 aaKnown RBP9.54□□□□□ -0.88
RFC4-210ENST00000449502 MAP4P27816 1152 aaKnown RBP9.54□□□□□ -0.88
RFC4-210ENST00000449502 OXTRP30559 389 aa9.54□□□□□ -0.88
RFC4-210ENST00000449502 MAT2AP31153 395 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms