RNA–Protein interactions for RNA: ENST00000448967.1

ALS2CR12-208, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, human

TSL 3

Gene ALS2CR12, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ALS2CR12-208	ENST00000448967	MSH2	P43246	934 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	TPD52	P55327	224 aa	Predicted RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	HSD17B7	P56937	341 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	UBASH3A	P57075	661 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	UBXN1	Q04323	297 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	EIF4A2	Q14240	407 aa	Known RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	FGFBP1	Q14512	234 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	DRAP1	Q14919	205 aa	Predicted RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	WTAP	Q15007	396 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	TNIP1	Q15025	636 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	COL28A1	Q2UY09	1125 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	USP41	Q3LFD5	358 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	KRTCAP3	Q53RY4	240 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	ODF2	Q5BJF6	829 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	CEP85L	Q5SZL2	805 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	STXBP5	Q5T5C0	1151 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	SLC9C2	Q5TAH2	1124 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	ACAD10	Q6JQN1	1059 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	ADAM5	Q6NVV9	412 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	DUS1L	Q6P1R4	473 aa	Known RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	BRAT1	Q6PJG6	821 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	PQLC2	Q6ZP29	291 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	ASB18	Q6ZVZ8	466 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	BTN2A1	Q7KYR7	527 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	SLC46A3	Q7Z3Q1	461 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	PRPF39	Q86UA1	669 aa	Known RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	EPHX4	Q8IUS5	362 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	ZNF619	Q8N2I2	560 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	NGEF	Q8N5V2	710 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	METTL27	Q8N6F8	245 aa	Predicted RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	PCDH20	Q8N6Y1	951 aa	Known RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	AVL9	Q8NBF6	648 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	CADM4	Q8NFZ8	388 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	N4BP2L2	Q92802	583 aa	Predicted RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	FBXO17	Q96EF6	278 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	GRAMD2B	Q96HH9	432 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	PCYT2	Q99447	389 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	SYT17	Q9BSW7	474 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	DESI2	Q9BSY9	194 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	LRRC1	Q9BTT6	524 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	IFIH1	Q9BYX4	1025 aa	Known RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	PAIP1	Q9H074	479 aa	Known RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	OR10A4	Q9H209	315 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	GRPEL1	Q9HAV7	217 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	XAB2	Q9HCS7	855 aa	Known RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	TAAR2	Q9P1P5	351 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	ADD3	Q9UEY8	706 aa	Known RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	PRDM4	Q9UKN5	801 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	AGTPBP1	Q9UPW5	1226 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	TCF19	Q9Y242	345 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	AAR2	Q9Y312	384 aa	Known RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	OR2W1	Q9Y3N9	320 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	MTF2	Q9Y483	593 aa	Predicted RBP	2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	ATP6V0A2	Q9Y487	856 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	CYP46A1	Q9Y6A2	500 aa		2.55	□□□□□ -2
ALS2CR12-208	ENST00000448967	RSF1	Q96T23	1441 aa	Predicted RBP	2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	FLT1	P17948	1338 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	hCG_1807616	A0A1W2PRN6	198 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	FAM72C	H0Y354	149 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	SNAP23	O00161	211 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	UBE2C	O00762	179 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	TNFSF14	O43557	240 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	WDR1	O75083	606 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	GOSR1	O95249	250 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	PGM3	O95394	542 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	F9	P00740	461 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	SLC4A1	P02730	911 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	AMBP	P02760	352 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	MT-ND3	P03897	115 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	NR2F1	P10589	423 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	FGF5	P12034	268 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	ABCD3	P28288	659 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	ARL1	P40616	181 aa	Predicted RBP	2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	PAFAH1B1	P43034	410 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	FASLG	P48023	281 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	CCR9	P51686	369 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	LINC01547	P58512	204 aa	Predicted RBP	2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	ISL1	P61371	349 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	EEF1A1	P68104	462 aa	Known RBP	2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	CSNK2A1	P68400	391 aa	Predicted RBP	2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	UBXN2A	P68543	259 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	GTF2H2	Q13888	395 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	TAF7	Q15545	349 aa	Predicted RBP	2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	CCDC6	Q16204	474 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	GSTA3	Q16772	222 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	ALG11	Q2TAA5	492 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	PDSS1	Q5T2R2	415 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	FAM69A	Q5T7M9	428 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	FAM72A	Q5TYM5	149 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	EEF1A1P5	Q5VTE0	462 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	SNX30	Q5VWJ9	437 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	FRG2	Q64ET8	278 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	SIGIRR	Q6IA17	410 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	FAM72D	Q6L9T8	149 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	NAA16	Q6N069	864 aa	Predicted RBP	2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	GTF2H2C	Q6P1K8	395 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	ZNF852	Q6ZMS4	543 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	FAM47E	Q6ZV65	393 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	TMTC3	Q6ZXV5	915 aa		2.54	□□□□□ -2
ALS2CR12-208	ENST00000448967	RAPH1	Q70E73	1250 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms