RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 LCP2Q13094 533 aa17.49■□□□□ 0.39
LMNA-208ENST00000448611 TGFBIQ15582 683 aa17.49■□□□□ 0.39
LMNA-208ENST00000448611 FBXO48Q5FWF7 155 aa17.49■□□□□ 0.39
LMNA-208ENST00000448611 SBSNQ6UWP8 590 aa17.49■□□□□ 0.39
LMNA-208ENST00000448611 HSD11B1LQ7Z5J1 315 aa17.49■□□□□ 0.39
LMNA-208ENST00000448611 TRPC4APQ8TEL6 797 aa17.49■□□□□ 0.39
LMNA-208ENST00000448611 ZNF483Q8TF39 744 aaPredicted RBP17.49■□□□□ 0.39
LMNA-208ENST00000448611 CATSPER2Q96P56 530 aa17.49■□□□□ 0.39
LMNA-208ENST00000448611 LENG8Q96PV6 779 aaPredicted RBP17.49■□□□□ 0.39
LMNA-208ENST00000448611 DENND2DQ9H6A0 471 aaPredicted RBP17.49■□□□□ 0.39
LMNA-208ENST00000448611 HPS4Q9NQG7 708 aa17.49■□□□□ 0.39
LMNA-208ENST00000448611 LATS2Q9NRM7 1088 aa17.49■□□□□ 0.39
LMNA-208ENST00000448611 DEC1Q9P2X7 70 aa17.49■□□□□ 0.39
LMNA-208ENST00000448611 CD84Q9UIB8 345 aa17.49■□□□□ 0.39
LMNA-208ENST00000448611 G3BP2Q9UN86 482 aaKnown RBP17.49■□□□□ 0.39
LMNA-208ENST00000448611 LOC100653049A0A140TA62 436 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 KRT34O76011 436 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 CD1EP15812 388 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 PIK3R1P27986 724 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 AGTR2P50052 363 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 PDGFRLQ15198 375 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 WASHC2DQ5SRD0 308 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 TANGO2Q6ICL3 276 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 TMEM184AQ6ZMB5 413 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 CHSY3Q70JA7 882 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 ADAMTSL2Q86TH1 951 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 ZBTB2Q8N680 514 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 AGAP11Q8TF27 550 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 SPATS2LQ9NUQ6 558 aaKnown RBP17.48■□□□□ 0.39
LMNA-208ENST00000448611 NUDT4Q9NZJ9 180 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 CD274Q9NZQ7 290 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 PCTPQ9UKL6 214 aa17.48■□□□□ 0.39
LMNA-208ENST00000448611 COPG1Q9Y678 874 aaKnown RBP17.48■□□□□ 0.39
LMNA-208ENST00000448611 SNX2O60749 519 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 GM2AP17900 193 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 DGKAP23743 735 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 RGS4P49798 205 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 RAP1GDS1P52306 607 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 DCDC1P59894 354 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 MXRA7P84157 204 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 RALGDSQ12967 914 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 PPP1R3AQ16821 1122 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 ACSBG2Q5FVE4 666 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 KANK2Q63ZY3 851 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 SYCE2Q6PIF2 218 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 DPPA4Q7L190 304 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 ARHGAP24Q8N264 748 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 DTX3LQ8TDB6 740 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 ABCG8Q9H221 673 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 ZBTB26Q9HCK0 441 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 SMOXQ9NWM0 555 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 THG1LQ9NWX6 298 aaKnown RBP17.47■□□□□ 0.39
LMNA-208ENST00000448611 DNAJC15Q9Y5T4 150 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 KIF26AQ9ULI4 1882 aaPredicted RBP17.47■□□□□ 0.39
LMNA-208ENST00000448611 A0A1B0GTL3 188 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 C16orf96A6NNT2 1141 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 AZIN1O14977 448 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 TM7SF2O76062 418 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 NFKBIAP25963 317 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 FOXA1P55317 472 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 SLC25A3Q00325 362 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 MYO1HQ8N1T3 1032 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 MAGEC3Q8TD91 643 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 MRPL38Q96DV4 380 aaKnown RBP17.47■□□□□ 0.39
LMNA-208ENST00000448611 MARK4Q96L34 752 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 FAM83DQ9H4H8 585 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 SEMA4BQ9NPR2 832 aaPredicted RBP17.47■□□□□ 0.39
LMNA-208ENST00000448611 UTP6Q9NYH9 597 aaKnown RBP17.47■□□□□ 0.39
LMNA-208ENST00000448611 NFKBIL1Q9UBC1 381 aaPredicted RBP17.47■□□□□ 0.39
LMNA-208ENST00000448611 TSR3Q9UJK0 312 aaKnown RBP17.47■□□□□ 0.39
LMNA-208ENST00000448611 ASB1Q9Y576 335 aa17.47■□□□□ 0.39
LMNA-208ENST00000448611 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.47■□□□□ 0.39
LMNA-208ENST00000448611 MUC22E2RYF6 1773 aaPredicted RBP17.47■□□□□ 0.39
LMNA-208ENST00000448611 COL4A3Q01955 1670 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 RGSL1A5PLK6 1076 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 SOX1O00570 391 aaPredicted RBP17.46■□□□□ 0.39
LMNA-208ENST00000448611 E2F3O00716 465 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 LINC01565O15544 149 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 THRAP10827 490 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 EIF4HQ15056 248 aaKnown RBP17.46■□□□□ 0.39
LMNA-208ENST00000448611 CRY1Q16526 586 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 POM121L1PQ3SYA9 428 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 VITQ6UXI7 678 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 Q6ZVL8 140 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 LARP4Q71RC2 724 aaKnown RBP eCLIP17.46■□□□□ 0.397e-8■■□□□ 11.8
LMNA-208ENST00000448611 SCAMP4Q969E2 229 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 C19orf60Q96EN9 201 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 SPATA16Q9BXB7 569 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 ZFP14Q9HCL3 533 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 KLHL42Q9P2K6 505 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 CDH7Q9ULB5 785 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 MYO9BQ13459 2157 aa17.46■□□□□ 0.39
LMNA-208ENST00000448611 XPAP23025 273 aaPredicted RBP17.45■□□□□ 0.38
LMNA-208ENST00000448611 MMP12P39900 470 aa17.45■□□□□ 0.38
LMNA-208ENST00000448611 ETV3P41162 512 aa17.45■□□□□ 0.38
LMNA-208ENST00000448611 FCHO2Q0JRZ9 810 aa17.45■□□□□ 0.38
LMNA-208ENST00000448611 HYAL1Q12794 435 aa17.45■□□□□ 0.38
LMNA-208ENST00000448611 HNRNPA1L2Q32P51 320 aaKnown RBP17.45■□□□□ 0.38
LMNA-208ENST00000448611 C9orf64Q5T6V5 341 aa17.45■□□□□ 0.38
LMNA-208ENST00000448611 ANKRD54Q6NXT1 300 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms