RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 FNBP1LQ5T0N5 605 aa12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 DUPD1Q68J44 220 aa12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 MRNIPQ6NTE8 343 aa12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 TMEM220Q6QAJ8 160 aa12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 CES3Q6UWW8 571 aa12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 SDCCAG8Q86SQ7 713 aaPredicted RBP12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 TMEM135Q86UB9 458 aa12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 SIGLEC10Q96LC7 697 aa12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 TIMM29Q9BSF4 260 aa12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 LRRC1Q9BTT6 524 aa12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 BOCQ9BWV1 1114 aa12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 TAAR2Q9P1P5 351 aa12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 APOBEC2Q9Y235 224 aaKnown RBP12.9□□□□□ -0.34
ERGIC3-209ENST00000447986 IGLV3-16A0A075B6K0 115 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 ESPNB1AK53 854 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 B4DGG1 531 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 CD3EAPO15446 510 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 ZNF500O60304 480 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 CDK4P11802 303 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 CKMT1AP12532 417 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 ZNF7P17097 686 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 CDKN1CP49918 316 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 DRG2P55039 364 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 BIRC2Q13490 618 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 THOC5Q13769 683 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 NR0B2Q15466 257 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 DBN1Q16643 649 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 PROX2Q3B8N5 592 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 ANKRD20A4Q4UJ75 823 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 CENPUQ71F23 418 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 DET1Q7L5Y6 550 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 AMZ2Q86W34 360 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 NRROSQ86YC3 692 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 PIANPQ8IYJ0 282 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 OR6C4Q8NGE1 309 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 ZDHHC1Q8WTX9 485 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 SGF29Q96ES7 293 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 EBNA1BP2Q99848 306 aaKnown RBP12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 OSGEPL1Q9H4B0 414 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 KLC4Q9NSK0 619 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 SIRPGQ9P1W8 387 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 GULP1Q9UBP9 304 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 KCNK6Q9Y257 313 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 LRP4O75096 1905 aa12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 COL5A1P20908 1838 aaPredicted RBP12.89□□□□□ -0.35
ERGIC3-209ENST00000447986 AP2A2O94973 939 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 NUDT7P0C024 238 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 IDSP22304 550 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 CA5AP35218 305 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 CLCNKAP51800 687 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 LONRF1Q17RB8 773 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 PLA2G4EQ3MJ16 856 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 BCL7AQ4VC05 210 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 SPANXN3Q5MJ09 141 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 RNF187Q5TA31 235 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 PACS1Q6VY07 963 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 ZNF547Q8IVP9 402 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 LMNTD2Q8IXW0 634 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 CALML6Q8TD86 181 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 NAT6Q93015 286 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 TSSK1BQ9BXA7 367 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 SPATS2LQ9NUQ6 558 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 VPS9D1Q9Y2B5 631 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 PLEKHM1Q9Y4G2 1056 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 MYLKQ15746 1914 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 KNL1Q8NG31 2342 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 SPAARA0A1B0GVQ0 90 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 GIPC1O14908 333 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 NDUFS3O75489 264 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 POP7O75817 140 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 GSTM1P09488 218 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 OR56A5P0C7T3 313 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 PRSS56P0CW18 603 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 ACP1P24666 158 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 PRLHRP49683 370 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 CTSCP53634 463 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 PLTPP55058 493 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 B4GALNT1Q00973 533 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 SLC7A5Q01650 507 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 GSTM4Q03013 218 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 PDIA2Q13087 525 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 ILKQ13418 452 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 ZNF449Q6P9G9 518 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 OGFOD3Q6PK18 319 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 SLC35F3Q8IY50 421 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 AVL9Q8NBF6 648 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 LINC00615Q96LM1 132 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 TCF12Q99081 682 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 CARD6Q9BX69 1037 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 STN1Q9H668 368 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 C20orf96Q9NUD7 363 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 GRHL1Q9NZI5 618 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 ZC3H7BQ9UGR2 993 aaKnown RBP12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 PADI4Q9UM07 663 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 DNAJC16Q9Y2G8 782 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 PCDHGA1Q9Y5H4 931 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 PCYT1BQ9Y5K3 369 aaPredicted RBP12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 FAM169AQ9Y6X4 670 aa12.88□□□□□ -0.35
ERGIC3-209ENST00000447986 ASCC3Q8N3C0 2202 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms