RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 MYL12AP19105 171 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 RPA3P35244 121 aaPredicted RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 RPL19P84098 196 aaKnown RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 KCNC3Q14003 757 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 KCTD19Q17RG1 926 aaPredicted RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 SUPT20HL1Q3ZLR7 823 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 BLOC1S3Q6QNY0 202 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 MFSD6LQ8IWD5 586 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 MAP6Q96JE9 813 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 JPH4Q96JJ6 628 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 ZNF778Q96MU6 729 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 FOPNLQ96NB1 174 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 TBCBQ99426 244 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 PBDC1Q9BVG4 233 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 FUNDC2Q9BWH2 189 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 CDK19Q9BWU1 502 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 PIGMQ9H3S5 423 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 COQ10BQ9H8M1 238 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 ARMT1Q9H993 441 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 CYP3A43Q9HB55 503 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 LRRC4Q9HBW1 653 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 POLD4Q9HCU8 107 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 SLC9A8Q9Y2E8 581 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 TCAF1Q9Y4C2 921 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 PRG4Q92954 1404 aaPredicted RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 HEATR1Q9H583 2144 aaKnown RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 ZNF729A6NN14 1252 aaPredicted RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 hCG_2039718K7EN88 272 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 CAPN5O15484 640 aaPredicted RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 NRP2O60462 931 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 CRCPO75575 148 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 PROSCO94903 275 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 CFBP00751 764 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 MBP02144 154 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 PLEKP08567 350 aaPredicted RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 TSPAN19P0C672 248 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 ARP10275 920 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 KELP23276 732 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 SCN1AP35498 2009 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 OPRL1P41146 370 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 SLC7A2P52569 658 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 CDH8P55286 799 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 WNT7BP56706 349 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 EEFSECP57772 596 aaKnown RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 TOMM34Q15785 309 aaPredicted RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 PIGGQ5H8A4 983 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 USP49Q70CQ1 688 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 PTF1AQ7RTS3 328 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 RNF130Q86XS8 419 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 ACOT12Q8WYK0 555 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 RAD51AP1Q96B01 352 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 YIPF4Q9BSR8 244 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 EMC7Q9NPA0 242 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 ACOXLQ9NUZ1 547 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 DNAJC5BQ9UF47 199 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 SSR3Q9UNL2 185 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 COL3A1P02461 1466 aaPredicted RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 MEIOCA2RUB1 952 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 EFCAB7A8K855 629 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 SLC43A1O75387 559 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 DDNO94850 711 aaPredicted RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 ARIH2O95376 493 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 TDP2O95551 362 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 ANXA5P08758 320 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 SLC1A3P43003 542 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 ARHGDIBP52566 201 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 C1QBPQ07021 282 aaKnown RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 TNK1Q13470 666 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 RIN1Q13671 783 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 VEPH1Q14D04 833 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 POLD3Q15054 466 aaPredicted RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 NAXDQ8IW45 347 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 IFNL2Q8IZJ0 200 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 ZNF444Q8N0Y2 327 aaPredicted RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 OR8H3Q8N146 312 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 IL17RCQ8NAC3 791 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 TRPM4Q8TD43 1214 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 GTF2H4Q92759 462 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 RAB7BQ96AH8 199 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 C3orf49Q96BT1 292 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 FAM89AQ96GI7 184 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 FAM20AQ96MK3 541 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 SEPT5Q99719 369 aaPredicted RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 TRIT1Q9H3H1 467 aaKnown RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 PDZD7Q9H5P4 517 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 REEP4Q9H6H4 257 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 POLE4Q9NR33 117 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 TREM2Q9NZC2 230 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 TMEM181Q9P2C4 612 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 DIMT1Q9UNQ2 313 aaKnown RBP2.9□□□□□ -1.95
CHD9-203ENST00000447540 PCDHGB5Q9Y5G0 923 aa2.9□□□□□ -1.95
CHD9-203ENST00000447540 BCLAF3A2AJT9 711 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 LACTBL1A8MY62 500 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 IMPA2O14732 288 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 NARSO43776 548 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 PIGNO95427 931 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 GUCA1CO95843 209 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 C2P06681 752 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 RRASP10301 218 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 FUT4P22083 530 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms