RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 FUBP3Q96I24 572 aaKnown RBP eCLIP18.88■□□□□ 0.613e-11■■■■■ 48.5
SDCBP-204ENST00000447182 ACOX2Q99424 681 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 GPN2Q9H9Y4 310 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-204ENST00000447182 GALPQ9UBC7 116 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 IFRD1O00458 451 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-204ENST00000447182 SYNCRIPO60506 623 aaKnown RBP18.88■□□□□ 0.61
SDCBP-204ENST00000447182 ABCB7O75027 752 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 THRBP10828 461 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 ELK4P28324 431 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 OR1E1P30953 314 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 SFSWAPQ12872 951 aaKnown RBP18.88■□□□□ 0.61
SDCBP-204ENST00000447182 SPIDRQ14159 915 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 CCL14Q16627 93 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 OTUD3Q5T2D3 398 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-204ENST00000447182 XAF1Q6GPH4 301 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 GDF6Q6KF10 455 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-204ENST00000447182 SLC2A7Q6PXP3 512 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 Q6ZSR9 355 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 DTWD1Q8N5C7 304 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 AADATQ8N5Z0 425 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 RAB2BQ8WUD1 216 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 NRBF2Q96F24 287 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 RPRD1AQ96P16 312 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-204ENST00000447182 PTPN18Q99952 460 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 MTG1Q9BT17 334 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-204ENST00000447182 IL37Q9NZH6 218 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 PADI3Q9ULW8 664 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 VPS9D1Q9Y2B5 631 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 F8W810 466 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 E2F3O00716 465 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 ENPP3O14638 875 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 MAP4P27816 1152 aaKnown RBP18.87■□□□□ 0.61
SDCBP-204ENST00000447182 SHMT2P34897 504 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 SOX11P35716 441 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 BMXP51813 675 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 DSC3Q14574 896 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 FAM98BQ52LJ0 330 aaKnown RBP18.87■□□□□ 0.61
SDCBP-204ENST00000447182 SDHAF4Q5VUM1 108 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 SCIMPQ6UWF3 145 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 DCDC5Q6ZRR9 648 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 THAP5Q7Z6K1 395 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 ITIH5Q86UX2 942 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 SERINC5Q86VE9 423 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 TMBIM1Q969X1 311 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 AURKBQ96GD4 344 aaPredicted RBP18.87■□□□□ 0.61
SDCBP-204ENST00000447182 TDRD1Q9BXT4 1180 aaKnown RBP18.87■□□□□ 0.61
SDCBP-204ENST00000447182 FANCEQ9HB96 536 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 ST14Q9Y5Y6 855 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 V9GYQ6 96 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 ANKRD12Q6UB98 2062 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 SCN10AQ9Y5Y9 1956 aa18.87■□□□□ 0.61
SDCBP-204ENST00000447182 NCF1BA6NI72 391 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 NCF1CA8MVU1 366 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 IGLV3-27P01718 113 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 ANXA6P08133 673 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 TFPTP0C1Z6 253 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 NCF1P14598 390 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 ZNF182P17025 639 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 EEF1B2P24534 225 aaKnown RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 DDR2Q16832 855 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 FKBP9P1Q75LS8 142 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 CIR1Q86X95 450 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 TRUB1Q8WWH5 349 aaKnown RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 SNX19Q92543 992 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 MAGED4Q96JG8 741 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 CCDC115Q96NT0 180 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 MGME1Q9BQP7 344 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 ING2Q9H160 280 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 PIF1Q9H611 641 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 HPS4Q9NQG7 708 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 GNPTGQ9UJJ9 305 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 CHD5Q8TDI0 1954 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 FAM92AA1XBS5 289 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 VPS26AO75436 327 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 OR4F21O95013 312 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 ZBTB11O95625 1053 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 PORP16435 677 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 GGT1P19440 569 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 CRHBPP24387 322 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 GSTM2P28161 218 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 CD52P31358 61 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 GPR15P49685 360 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 HK3P52790 923 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 TAF1AQ15573 450 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 TGFBIQ15582 683 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 PTPRNQ16849 979 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 RALGPS2Q86X27 583 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 GPSM1Q86YR5 675 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 ZC3H7AQ8IWR0 971 aaKnown RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 OR4K2Q8NGD2 314 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 ITFG1Q8TB96 612 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 HDAC2Q92769 488 aaKnown RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 CGREF1Q99674 301 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 OLA1Q9NTK5 396 aaKnown RBP18.86■□□□□ 0.61
SDCBP-204ENST00000447182 COMMD8Q9NX08 183 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 PSME2Q9UL46 239 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 SPO11Q9Y5K1 396 aa18.86■□□□□ 0.61
SDCBP-204ENST00000447182 MYADML2A6NDP7 307 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 SOBPA7XYQ1 873 aa18.85■□□□□ 0.61
SDCBP-204ENST00000447182 B4GAT1O43505 415 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms