RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 GPR42O15529 346 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 OLFM2O95897 454 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 SRCP12931 536 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 HSPA7P48741 367 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 SLC7A2P52569 658 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 AP1S1P61966 158 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 LRRC66Q68CR7 880 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 TMEM154Q6P9G4 183 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 DPY19L3Q6ZPD9 716 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 FUNDC1Q8IVP5 155 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 SEMA6AQ9H2E6 1030 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 DLGAP2Q9P1A6 1054 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 HSFX1Q9UBD0 423 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 CIDEBQ9UHD4 219 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 GLYATL1P3A0A0U1RQE8 302 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 LILRB3O75022 631 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 ZNF821O75541 412 aaPredicted RBP16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 ACADSP16219 412 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 SYN1P17600 705 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 IRS1P35568 1242 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 PTGER3P43115 390 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 ATP6V0D1P61421 351 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 NFATC2Q13469 925 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 SLC5A9Q2M3M2 681 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 GPR26Q8NDV2 337 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 OR2AP1Q8NGE2 309 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 KLHL32Q96NJ5 620 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 ECSITQ9BQ95 431 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 PCDHGA7Q9Y5G6 932 aa16.62■□□□□ 0.25
LAPTM4B-201ENST00000445593 CAPN8A6NHC0 703 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 SYCE1LA8MT33 242 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 GAPDHSO14556 408 aaPredicted RBP16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 ITGALP20701 1170 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 HTR6P50406 440 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 CLCN7P51798 805 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 NFKB2Q00653 900 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 SLC44A4Q53GD3 710 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 AARS2Q5JTZ9 985 aaKnown RBP16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 RETREG3Q86VR2 466 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 TEX37Q96LM6 180 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 LRRC3Q9BY71 257 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.61■□□□□ 0.253e-6■■■□□ 17.8
LAPTM4B-201ENST00000445593 HACD3Q9P035 362 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 PCTPQ9UKL6 214 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 H3BNX3 289 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 HOXB8P17481 243 aaPredicted RBP16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 SERPINA4P29622 427 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 AAK1Q2M2I8 961 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 CHSY3Q70JA7 882 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 GALNT4Q8N4A0 578 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 KCNJ9Q92806 393 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 PRM3Q9NNZ6 103 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 MBD1Q9UIS9 605 aaPredicted RBP16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 RIMKLBQ9ULI2 386 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 PRORSD1PA6NEY8 169 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 NRP2O60462 931 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 MYOGP15173 224 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 ZNF7P17097 686 aaPredicted RBP16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 KLC1Q07866 573 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 STX5Q13190 355 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 PHKG1Q16816 387 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 DRAXINQ8NBI3 349 aaPredicted RBP16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 BADQ92934 168 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 PIDD1Q9HB75 910 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 POPDC3Q9HBV1 291 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 MAGEE1Q9HCI5 957 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 EGFL7Q9UHF1 273 aa16.61■□□□□ 0.25
LAPTM4B-201ENST00000445593 ATP6V1G1O75348 118 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 ESR1P03372 595 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 EPCAMP16422 314 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 CAPN3P20807 821 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 HTR3DQ70Z44 454 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 KBTBD6Q86V97 674 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 ACDQ96AP0 544 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 PRPF19Q9UMS4 504 aaKnown RBP16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 VPS9D1Q9Y2B5 631 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 LRCH1Q9Y2L9 728 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 INHBCP55103 352 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 MAP7D1Q3KQU3 841 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 LY6G5CQ5SRR4 150 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 ZNF648Q5T619 568 aaPredicted RBP16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 KANK2Q63ZY3 851 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 LETMD1Q6P1Q0 360 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 ZNF783Q6ZMS7 281 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 OR2T11Q8NH01 316 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 POF1BQ8WVV4 589 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 ZSWIM3Q96MP5 696 aa16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 DNMT3BQ9UBC3 853 aaKnown RBP16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 GOLGA4Q13439 2230 aaKnown RBP16.6■□□□□ 0.25
LAPTM4B-201ENST00000445593 LHCGRP22888 699 aa16.59■□□□□ 0.25
LAPTM4B-201ENST00000445593 C22orf39Q6P5X5 142 aa16.59■□□□□ 0.25
LAPTM4B-201ENST00000445593 CRTC1Q6UUV9 634 aa16.59■□□□□ 0.25
LAPTM4B-201ENST00000445593 IL27RAQ6UWB1 636 aa16.59■□□□□ 0.25
LAPTM4B-201ENST00000445593 CCDC149Q6ZUS6 474 aa16.59■□□□□ 0.25
LAPTM4B-201ENST00000445593 FAM110BQ8TC76 370 aa16.59■□□□□ 0.25
LAPTM4B-201ENST00000445593 METTL6Q8TCB7 284 aa16.59■□□□□ 0.25
LAPTM4B-201ENST00000445593 JADE3Q92613 823 aa16.59■□□□□ 0.25
LAPTM4B-201ENST00000445593 SCAMP4Q969E2 229 aa16.59■□□□□ 0.25
LAPTM4B-201ENST00000445593 MTFMTQ96DP5 389 aaKnown RBP16.59■□□□□ 0.25
LAPTM4B-201ENST00000445593 CERS4Q9HA82 394 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms