RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 AGO1Q9UL18 857 aaKnown RBP11.75□□□□□ -0.53
MSH6-204ENST00000445503 PNMA8BQ9ULN7 279 aaPredicted RBP11.75□□□□□ -0.53
MSH6-204ENST00000445503 COQ6Q9Y2Z9 468 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 LTBP3Q9NS15 1303 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 RAD51BO15315 384 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 MAGP20916 626 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 ADRA1AP35348 466 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 RPL34P49207 117 aaKnown RBP11.75□□□□□ -0.53
MSH6-204ENST00000445503 ZNF33AQ06730 810 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 GRB14Q14449 540 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 MEP1AQ16819 746 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 C18orf21Q32NC0 220 aaPredicted RBP11.75□□□□□ -0.53
MSH6-204ENST00000445503 FAM174BQ3ZCQ3 159 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 USP50Q70EL3 339 aaPredicted RBP11.75□□□□□ -0.53
MSH6-204ENST00000445503 ADGRG5Q8IZF4 528 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 TTC9BQ8N6N2 239 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 OR52B6Q8NGF0 335 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 FNDC8Q8TC99 324 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 TSSK3Q96PN8 268 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 CCSER2Q9H7U1 834 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 MRM3Q9HC36 420 aaKnown RBP11.75□□□□□ -0.53
MSH6-204ENST00000445503 SCN3BQ9NY72 215 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 SH3GLB1Q9Y371 365 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 MBLAC1A4D2B0 266 aaPredicted RBP11.75□□□□□ -0.53
MSH6-204ENST00000445503 KERAO60938 352 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 RAB41Q5JT25 222 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 BLOC1S3Q6QNY0 202 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 PROSER1Q86XN7 944 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 PLEKHA8Q96JA3 519 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 GLT1D1Q96MS3 346 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 OR52E6Q96RD3 313 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 OPTCQ9UBM4 332 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 CIDEBQ9UHD4 219 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 MAGEL2Q9UJ55 1249 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 TLR6Q9Y2C9 796 aa11.75□□□□□ -0.53
MSH6-204ENST00000445503 MYADML2A6NDP7 307 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 EVPLLA8MZ36 301 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 BMP10O95393 424 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 TACR2P21452 398 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 STC1P52823 247 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 IL10RBQ08334 325 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 NHSL2Q5HYW2 709 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 GPR180Q86V85 440 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 SNX19Q92543 992 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 SLC47A1Q96FL8 570 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 ZNF419Q96HQ0 510 aaPredicted RBP11.74□□□□□ -0.53
MSH6-204ENST00000445503 LRRC3Q9BY71 257 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 RAI2Q9Y5P3 530 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 HHLA1C9JL84 531 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 GPR39O43194 453 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 ULK1O75385 1050 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 RFC2P35250 354 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 TTPAP49638 278 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 ERVK-8P63133 956 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 PTPRRQ15256 657 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 C6orf136Q5SQH8 315 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 ZNF467Q7Z7K2 595 aaPredicted RBP11.74□□□□□ -0.53
MSH6-204ENST00000445503 HS3ST5Q8IZT8 346 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 MINDY1Q8N5J2 469 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 PACRGLQ8N7B6 248 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 MYRFLQ96LU7 910 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 ASB8Q9H765 288 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 RASSF1Q9NS23 344 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 CD300AQ9UGN4 299 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 SSC5DA1L4H1 1573 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 EFNA1P20827 205 aaPredicted RBP11.74□□□□□ -0.53
MSH6-204ENST00000445503 CDH3P22223 829 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 DAG1Q14118 895 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 PAGE2BQ5JRK9 111 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 RNF219Q5W0B1 726 aaPredicted RBP11.74□□□□□ -0.53
MSH6-204ENST00000445503 ZNF549Q6P9A3 640 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 CYP20A1Q6UW02 462 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 HID1Q8IV36 788 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 OR7A2PQ8NGA2 310 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 HMGCLL1Q8TB92 370 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 KIAA1191Q96A73 305 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 UBXN10Q96LJ8 280 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 TEX37Q96LM6 180 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 ROGDIQ9GZN7 287 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 ELOVL6Q9H5J4 265 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 CD320Q9NPF0 282 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 PCDH12Q9NPG4 1184 aa11.74□□□□□ -0.53
MSH6-204ENST00000445503 ARID2Q68CP9 1835 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 IQCA1LA6NCM1 817 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 AGRPO00253 132 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 CBFA2T3O75081 653 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 S100A3P33764 101 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 HTR6P50406 440 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 SEMA3AQ14563 771 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 R3HCC1LQ7Z5L2 792 aaKnown RBP11.73□□□□□ -0.53
MSH6-204ENST00000445503 ZNF280BQ86YH2 543 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 SMYD1Q8NB12 490 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 TPD52L3Q96J77 140 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 ZNF385DQ9H6B1 395 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 INTS10Q9NVR2 710 aaKnown RBP11.73□□□□□ -0.53
MSH6-204ENST00000445503 ARMC1Q9NVT9 282 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 HSFX1Q9UBD0 423 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 TSC22D4Q9Y3Q8 395 aa11.73□□□□□ -0.53
MSH6-204ENST00000445503 ZFP37Q9Y6Q3 630 aaPredicted RBP11.73□□□□□ -0.53
MSH6-204ENST00000445503 RBM47A0AV96 593 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms