RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 RHPN2P1A8MT19 583 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 AGAP14A8MT82 685 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 MGAT1P26572 445 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 MAGEA6P43360 314 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 CDKN1CP49918 316 aaPredicted RBP23.58■■□□□ 1.37
C9orf3-207ENST00000445181 ARSDP51689 593 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 CTSCP53634 463 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 FNBP1LQ5T0N5 605 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 SERPINA9Q86WD7 417 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 ARL14Q8N4G2 192 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 Q8N9G6 341 aaPredicted RBP23.58■■□□□ 1.37
C9orf3-207ENST00000445181 OR13J1Q8NGT2 312 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 OR6P1Q8NGX9 317 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 HEXDCQ8WVB3 486 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 HDAC10Q969S8 669 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.58■■□□□ 1.371e-8■■■■■ 41.2
C9orf3-207ENST00000445181 SGF29Q96ES7 293 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 ZNF514Q96K75 400 aaPredicted RBP23.58■■□□□ 1.37
C9orf3-207ENST00000445181 CHRAC1Q9NRG0 131 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 RIMKLBQ9ULI2 386 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 PCDHB1Q9Y5F3 818 aa23.58■■□□□ 1.37
C9orf3-207ENST00000445181 ACACAQ13085 2346 aa23.58■■□□□ 1.36
C9orf3-207ENST00000445181 RP1P56715 2156 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 CCDC162PA2VCL2 907 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 OR51F1A6NGY5 319 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 GOLGA8MH3BSY2 632 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 CCDC188H7C350 402 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 NUDT21O43809 227 aaKnown RBP23.57■■□□□ 1.36
C9orf3-207ENST00000445181 PRSS56P0CW18 603 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 SLC2A4P14672 509 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 ACRV1P26436 265 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 PRAMEP78395 509 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 DR1Q01658 176 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 AFTPHQ6ULP2 937 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 MICALCLQ6ZW33 695 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 ZNF534Q76KX8 674 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 AMZ2Q86W34 360 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 C16orf45Q96MC5 204 aaPredicted RBP23.57■■□□□ 1.36
C9orf3-207ENST00000445181 ZNF778Q96MU6 729 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 PRDM8Q9NQV8 689 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 SYBUQ9NX95 663 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 ZDHHC3Q9NYG2 299 aa23.57■■□□□ 1.36
C9orf3-207ENST00000445181 PDZK1P1A8MUH7 402 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 AVILO75366 819 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 CSO75390 466 aaKnown RBP23.56■■□□□ 1.36
C9orf3-207ENST00000445181 POP7O75817 140 aaKnown RBP23.56■■□□□ 1.36
C9orf3-207ENST00000445181 TMEM63AO94886 807 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 EML2O95834 649 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 PSMA3P25788 255 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 PBLDP30039 288 aaPredicted RBP23.56■■□□□ 1.36
C9orf3-207ENST00000445181 CLCNKAP51800 687 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 PTK6Q13882 451 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 SEPT7Q16181 437 aaKnown RBP23.56■■□□□ 1.36
C9orf3-207ENST00000445181 COL28A1Q2UY09 1125 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 CASC4Q6P4E1 433 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 C17orf82Q86X59 251 aaPredicted RBP23.56■■□□□ 1.36
C9orf3-207ENST00000445181 PPIL6Q8IXY8 311 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 NAT14Q8WUY8 206 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 SLCO2A1Q92959 643 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 PEX13Q92968 403 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 DCBLD2Q96PD2 775 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 RABGEF1Q9UJ41 708 aa23.56■■□□□ 1.36
C9orf3-207ENST00000445181 A0A087WV48 116 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 TRBV5-4A0A0C4DH59 114 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 ZW10O43264 779 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 BRINP1O60477 761 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 GOT2P00505 430 aaKnown RBP23.55■■□□□ 1.36
C9orf3-207ENST00000445181 RPLP0P05388 317 aaKnown RBP23.55■■□□□ 1.36
C9orf3-207ENST00000445181 F3P13726 295 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 ATP1B2P14415 290 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-207ENST00000445181 PNLIPP16233 465 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 IDSP22304 550 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 PTGIRP43119 386 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 B4GALNT1Q00973 533 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 SPIDRQ14159 915 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 IYDQ6PHW0 289 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 SYDE1Q6ZW31 735 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-207ENST00000445181 C11orf96Q7Z7L8 435 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 CCNJLQ8IV13 435 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 PIANPQ8IYJ0 282 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 SFRP1Q8N474 314 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 BEND7Q8N7W2 519 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-207ENST00000445181 MCUQ8NE86 351 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 WDR48Q8TAF3 677 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 SLC37A2Q8TED4 501 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 TTC1Q99614 292 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 STN1Q9H668 368 aaKnown RBP23.55■■□□□ 1.36
C9orf3-207ENST00000445181 XAB2Q9HCS7 855 aaKnown RBP23.55■■□□□ 1.36
C9orf3-207ENST00000445181 SAMD15Q9P1V8 674 aa23.55■■□□□ 1.36
C9orf3-207ENST00000445181 DNMT3AQ9Y6K1 912 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-207ENST00000445181 URB1O60287 2271 aaKnown RBP23.55■■□□□ 1.36
C9orf3-207ENST00000445181 ZFHX4Q86UP3 3567 aa23.54■■□□□ 1.36
C9orf3-207ENST00000445181 TLX3O43711 291 aaPredicted RBP23.54■■□□□ 1.36
C9orf3-207ENST00000445181 KCNJ13O60928 360 aa23.54■■□□□ 1.36
C9orf3-207ENST00000445181 RPL10P27635 214 aaKnown RBP23.54■■□□□ 1.36
C9orf3-207ENST00000445181 CCL7P80098 99 aa23.54■■□□□ 1.36
C9orf3-207ENST00000445181 ACVR1Q04771 509 aa23.54■■□□□ 1.36
C9orf3-207ENST00000445181 FASTKD1Q53R41 847 aaKnown RBP23.54■■□□□ 1.36
C9orf3-207ENST00000445181 SLC9B2Q86UD5 537 aa23.54■■□□□ 1.36
C9orf3-207ENST00000445181 CAND1Q86VP6 1230 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms