RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 SAA2-SAA4A0A096LPE2 208 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 A0A1B0GUV1 79 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 B4DLN1 442 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 ENTPD3O75355 529 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 MMP9P14780 707 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 ITGA2P17301 1181 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 MRPL12P52815 198 aaKnown RBP4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 SNX16P57768 344 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 STK4Q13043 487 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 PCLAFQ15004 111 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 ASIC2Q16515 512 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 RAB6CQ53S08 254 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 TRNP1Q6NT89 227 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 CCDC190Q86UF4 302 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 GPR180Q86V85 440 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 MAP7D3Q8IWC1 876 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 TAGAPQ8N103 731 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 SCML4Q8N228 414 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 EMC1Q8N766 993 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 GSDMBQ8TAX9 411 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 LNX1Q8TBB1 728 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 UTP15Q8TED0 518 aaKnown RBP4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 TTC14Q96N46 770 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 NUDCD1Q96RS6 583 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 SEMA3CQ99985 751 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 RAB6CQ9H0N0 254 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 HRH4Q9H3N8 390 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 PDE7BQ9NP56 450 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 TERF2IPQ9NYB0 399 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 KLHL9Q9P2J3 617 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 DNAJB4Q9UDY4 337 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 CFDP1Q9UEE9 299 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 DBNLQ9UJU6 430 aaKnown RBP4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 PLAGL1Q9UM63 463 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 VDAC3Q9Y277 283 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 PCDHGB1Q9Y5G3 927 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 PCDHAC2Q9Y5I4 1007 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 GPATCH8Q9UKJ3 1502 aaKnown RBP4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 ANKRD30AQ9BXX3 1397 aa4.4□□□□□ -1.71
HMGB3P6-201ENST00000444896 KDM6BO15054 1643 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 RPRD2Q5VT52 1461 aaKnown RBP4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 IGHV4OR15-8A0A075B7B6 117 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 PRAC2D3DTV9 90 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 CCER2I3L3R5 266 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 CTDSP2O14595 271 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 ACOT8O14734 319 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 ADAMDEC1O15204 470 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 WISP2O76076 250 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 BEST1O76090 585 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 CCKBRP32239 447 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 NRIP1P48552 1158 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 COG7P83436 770 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 PPP2R2BQ00005 443 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 KCNC3Q14003 757 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 MVPQ14764 893 aaKnown RBP4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 IZUMO4Q1ZYL8 232 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 CCDC96Q2M329 555 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 SPSB3Q6PJ21 355 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 RAD9BQ6WBX8 426 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 TPRG1Q6ZUI0 275 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 ASB18Q6ZVZ8 466 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 Q75L30 129 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 KBTBD6Q86V97 674 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 LINC00346Q8IVM7 164 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 ARID3BQ8IVW6 561 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 MCEMP1Q8IX19 187 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 BBS10Q8TAM1 723 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 SLC22A18Q96BI1 424 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 CDCA5Q96FF9 252 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 CCDC34Q96HJ3 373 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 FAM84BQ96KN1 310 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 DUX5Q96PT3 197 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 PPIL3Q9H2H8 161 aaKnown RBP4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 KLHL1Q9NR64 748 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 PLSCR4Q9NRQ2 329 aa4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 RALYQ9UKM9 306 aaKnown RBP4.39□□□□□ -1.71
HMGB3P6-201ENST00000444896 CDC42BPAQ5VT25 1732 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 KDM5BQ9UGL1 1544 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 PLSCR5A0PG75 271 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 SMTNL1A8MU46 457 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 HMGB1P1B2RPK0 211 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 J3QR06 171 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 TMCC2O75069 709 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 SNRNP70P08621 437 aaKnown RBP4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 CDH1P12830 882 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 PRLRP16471 622 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 TRIM21P19474 475 aaKnown RBP4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 KCNA5P22460 613 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 FUT6P51993 359 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 PNLIPRP2P54317 469 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 IFI35P80217 286 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 CXCL9Q07325 125 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 GTF2H2Q13888 395 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 ZNF234Q14588 700 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 TOMM20Q15388 145 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 GTF2H2CQ6P1K8 395 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 TUBA1AQ71U36 451 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 ZNF534Q76KX8 674 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 ENOSF1Q7L5Y1 443 aa4.38□□□□□ -1.71
HMGB3P6-201ENST00000444896 KMT5CQ86Y97 462 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms