RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, human

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP3-208	ENST00000444533	PDIA2	Q13087	525 aa	Known RBP	13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	PLA2G4E	Q3MJ16	856 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	SPANXN3	Q5MJ09	141 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	CES3	Q6UWW8	571 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	KANSL1	Q7Z3B3	1105 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	DGLUCY	Q7Z3D6	616 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	TMEM135	Q86UB9	458 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	BEND7	Q8N7W2	519 aa	Predicted RBP	13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	RASGEF1A	Q8N9B8	481 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	ZDHHC1	Q8WTX9	485 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	NAT6	Q93015	286 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	SGF29	Q96ES7	293 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	SIGLEC10	Q96LC7	697 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	APOLD1	Q96LR9	279 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	TCF12	Q99081	682 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	FAM167B	Q9BTA0	163 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	TSPYL1	Q9H0U9	437 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	PPAN	Q9NQ55	473 aa	Known RBP	13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	TMPRSS11E	Q9UL52	423 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	KCNK6	Q9Y257	313 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	DNAJC16	Q9Y2G8	782 aa		13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	TDRD6	O60522	2096 aa	Known RBP	13.9	□□□□□ -0.18
SSBP3-208	ENST00000444533	OR5K4	A6NMS3	321 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	PDZK1P1	A8MUH7	402 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	TRIM38	O00635	465 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	TM4SF5	O14894	197 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	POP7	O75817	140 aa	Known RBP	13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	KCNK5	O95279	499 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	FUCA1	P04066	466 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	AK4	P27144	223 aa	Predicted RBP	13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	PBLD	P30039	288 aa	Predicted RBP	13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	CLCNKA	P51800	687 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	TUBB4B	P68371	445 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	DBN1	Q16643	649 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	BCL7A	Q4VC05	210 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	KHDC1	Q4VXA5	237 aa	Known RBP	13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	CCDC157	Q569K6	752 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	NEPRO	Q6NW34	567 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	PACS1	Q6VY07	963 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	GLRX5	Q86SX6	157 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	LRRC6	Q86X45	466 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	PALM2	Q8IXS6	379 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	PYROXD1	Q8WU10	500 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	CFAP36	Q96G28	342 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	BOC	Q9BWV1	1114 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	ABCG4	Q9H172	646 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	CCDC68	Q9H2F9	335 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	EPB41L5	Q9HCM4	733 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	GNPTG	Q9UJJ9	305 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	CHMP2B	Q9UQN3	213 aa		13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.89	□□□□□ -0.19
SSBP3-208	ENST00000444533	ASCC3	Q8N3C0	2202 aa	Known RBP	13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	IGLV3-16	A0A075B6K0	115 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	UBA6	A0AVT1	1052 aa	Predicted RBP	13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	CPED1	A4D0V7	1026 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	RHPN2P1	A8MT19	583 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	CBFA2T3	O75081	653 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	CELA2B	P08218	269 aa	Predicted RBP	13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	CKMT1A	P12532	417 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	OGN	P20774	298 aa	Known RBP	13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	ELK3	P41970	407 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	PPM1F	P49593	454 aa	Predicted RBP	13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	PRLHR	P49683	370 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	CDKN1C	P49918	316 aa	Predicted RBP	13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	ILK	Q13418	452 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	CRYM	Q14894	314 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	PPM1J	Q5JR12	505 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	KCTD16	Q68DU8	428 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	PTRHD1	Q6GMV3	140 aa	Known RBP	13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	KCNMB4	Q86W47	210 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	CCDC25	Q86WR0	208 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	TRIM48	Q8IWZ4	208 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	PIANP	Q8IYJ0	282 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	ZBED8	Q8IZ13	594 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	CCL4L1	Q8NHW4	92 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	GSDMB	Q8TAX9	411 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	MAPK15	Q8TD08	544 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	ART4	Q93070	314 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	PANX3	Q96QZ0	392 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	CCM2	Q9BSQ5	444 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	PHACTR1	Q9C0D0	580 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	ACSL5	Q9ULC5	683 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	PADI4	Q9UM07	663 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	FAM169A	Q9Y6X4	670 aa		13.88	□□□□□ -0.19
SSBP3-208	ENST00000444533	KIR2DS5	A0A0G2JLQ3	304 aa		13.87	□□□□□ -0.19
SSBP3-208	ENST00000444533		A0A0G2JNG1	304 aa		13.87	□□□□□ -0.19
SSBP3-208	ENST00000444533	C17orf113	A0A1B0GUU1	675 aa		13.87	□□□□□ -0.19
SSBP3-208	ENST00000444533	MGAT4D	A6NG13	374 aa		13.87	□□□□□ -0.19
SSBP3-208	ENST00000444533		H3BMM5	538 aa		13.87	□□□□□ -0.19
SSBP3-208	ENST00000444533	KIR2DS3	K7RE56	304 aa		13.87	□□□□□ -0.19
SSBP3-208	ENST00000444533	PRMT5	O14744	637 aa	Predicted RBP	13.87	□□□□□ -0.19
SSBP3-208	ENST00000444533	RFPL3	O75679	317 aa		13.87	□□□□□ -0.19
SSBP3-208	ENST00000444533	TRIM16	O95361	564 aa		13.87	□□□□□ -0.19
SSBP3-208	ENST00000444533	SLC35G4	P0C7Q5	338 aa		13.87	□□□□□ -0.19
SSBP3-208	ENST00000444533	E2F1	Q01094	437 aa		13.87	□□□□□ -0.19
SSBP3-208	ENST00000444533	PLOD1	Q02809	727 aa	Predicted RBP	13.87	□□□□□ -0.19
SSBP3-208	ENST00000444533	KIR2DS5	Q14953	304 aa		13.87	□□□□□ -0.19

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