RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 CCDC117Q8IWD4 279 aaPredicted RBP11.53□□□□□ -0.56
HCFC1-203ENST00000444191 ARHGAP12Q8IWW6 846 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 EID3Q8N140 333 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 CARNMT1Q8N4J0 409 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 UTP15Q8TED0 518 aaKnown RBP11.53□□□□□ -0.56
HCFC1-203ENST00000444191 TAMM41Q96BW9 452 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 CLPBQ9H078 707 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 MARCH7Q9H992 704 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 PRDM8Q9NQV8 689 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 OLA1Q9NTK5 396 aaKnown RBP11.53□□□□□ -0.56
HCFC1-203ENST00000444191 H0Y858 1186 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 LSM1O15116 133 aaKnown RBP11.53□□□□□ -0.56
HCFC1-203ENST00000444191 SLC22A2O15244 555 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 FAM20BO75063 409 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 PRKD3O94806 890 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 POLR2IP36954 125 aaKnown RBP11.53□□□□□ -0.56
HCFC1-203ENST00000444191 IDH2P48735 452 aaKnown RBP11.53□□□□□ -0.56
HCFC1-203ENST00000444191 BMXP51813 675 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 AIF1P55008 147 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 SYT16Q17RD7 645 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 DENND5AQ6IQ26 1287 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 CARM1Q86X55 608 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 ZNF540Q8NDQ6 660 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 CDKN2AIPNLQ96HQ2 116 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 OR52E6Q96RD3 313 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 TOR3AQ9H497 397 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 PRDM16Q9HAZ2 1276 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 SCN3BQ9NY72 215 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 PADI3Q9ULW8 664 aa11.53□□□□□ -0.56
HCFC1-203ENST00000444191 DNAJC25-GNG10A0A024R161 153 aa11.52□□□□□ -0.56
HCFC1-203ENST00000444191 SLC7A4O43246 635 aa11.52□□□□□ -0.56
HCFC1-203ENST00000444191 CBFA2T3O75081 653 aa11.52□□□□□ -0.56
HCFC1-203ENST00000444191 HTR6P50406 440 aa11.52□□□□□ -0.56
HCFC1-203ENST00000444191 KCNQ1P51787 676 aa11.52□□□□□ -0.56
HCFC1-203ENST00000444191 LRRC74AQ0VAA2 488 aa11.52□□□□□ -0.56
HCFC1-203ENST00000444191 TRIP4Q15650 581 aaPredicted RBP11.52□□□□□ -0.56
HCFC1-203ENST00000444191 MAPRE1Q15691 268 aaKnown RBP11.52□□□□□ -0.56
HCFC1-203ENST00000444191 GPR162Q16538 588 aa11.52□□□□□ -0.56
HCFC1-203ENST00000444191 IFNLR1Q8IU57 520 aaPredicted RBP11.52□□□□□ -0.56
HCFC1-203ENST00000444191 TTC9BQ8N6N2 239 aa11.52□□□□□ -0.56
HCFC1-203ENST00000444191 CEP19Q96LK0 163 aa11.52□□□□□ -0.56
HCFC1-203ENST00000444191 RPF2Q9H7B2 306 aaKnown RBP11.52□□□□□ -0.56
HCFC1-203ENST00000444191 IPPKQ9H8X2 491 aa11.52□□□□□ -0.56
HCFC1-203ENST00000444191 TMEM181Q9P2C4 612 aa11.52□□□□□ -0.56
HCFC1-203ENST00000444191 SNX8Q9Y5X2 465 aa11.52□□□□□ -0.56
HCFC1-203ENST00000444191 AQP12BA6NM10 295 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 BBIP1A8MTZ0 92 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 DFNA5O60443 496 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 RPP40O75818 363 aaKnown RBP11.52□□□□□ -0.57
HCFC1-203ENST00000444191 GPIP06744 558 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 RHOCP08134 193 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 GPX3P22352 226 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 RXRGP48443 463 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 MLLT6P55198 1093 aaPredicted RBP11.52□□□□□ -0.57
HCFC1-203ENST00000444191 CACHD1Q5VU97 1274 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 LARP4Q71RC2 724 aaKnown RBP eCLIP11.52□□□□□ -0.57
HCFC1-203ENST00000444191 ITIH5Q86UX2 942 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 AQP12AQ8IXF9 295 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 CNIH3Q8TBE1 160 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 IGSF8Q969P0 613 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 ANKRD60Q9BZ19 345 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 SEPT3Q9UH03 358 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.52□□□□□ -0.57
HCFC1-203ENST00000444191 A0A1W2PP18 115 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 SH3PXD2BA1X283 911 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 CD1DP15813 335 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 ALOX12P18054 663 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 AGXTP21549 392 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 MRPS6P82932 125 aaKnown RBP11.52□□□□□ -0.57
HCFC1-203ENST00000444191 TXNL4AP83876 142 aaKnown RBP11.52□□□□□ -0.57
HCFC1-203ENST00000444191 HSPA14Q0VDF9 509 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 ZNF177Q13360 481 aaPredicted RBP11.52□□□□□ -0.57
HCFC1-203ENST00000444191 NHSL2Q5HYW2 709 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 SYVN1Q86TM6 617 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 SLC47A1Q96FL8 570 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 ASPSCR1Q9BZE9 553 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 SACM1LQ9NTJ5 587 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 UBA2Q9UBT2 640 aaPredicted RBP11.52□□□□□ -0.57
HCFC1-203ENST00000444191 VPS28Q9UK41 221 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 PDE10AQ9Y233 779 aa11.52□□□□□ -0.57
HCFC1-203ENST00000444191 COL1A2P08123 1366 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 TCRBV3S1A0A5B6 114 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.51□□□□□ -0.57
HCFC1-203ENST00000444191 RECQL5O94762 991 aaPredicted RBP11.51□□□□□ -0.57
HCFC1-203ENST00000444191 C8BP07358 591 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 HCAR3P49019 387 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 MCCD1P59942 119 aaPredicted RBP11.51□□□□□ -0.57
HCFC1-203ENST00000444191 NUMA1Q14980 2115 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 BRMS1LQ5PSV4 323 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 UBXN11Q5T124 520 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 TMEM236Q5W0B7 351 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 TTC23Q5W5X9 447 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 TBPL2Q6SJ96 375 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 PYCR2Q96C36 320 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 ZNF419Q96HQ0 510 aaPredicted RBP11.51□□□□□ -0.57
HCFC1-203ENST00000444191 HERC2P3Q9BVR0 1158 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 NPLQ9BXD5 320 aaPredicted RBP11.51□□□□□ -0.57
HCFC1-203ENST00000444191 EPB41L1Q9H4G0 881 aa11.51□□□□□ -0.57
HCFC1-203ENST00000444191 DUS2Q9NX74 493 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms