RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 CSGALNACT1Q8TDX6 532 aa10.48□□□□□ -0.73
CALD1-210ENST00000443197 ASZ1Q8WWH4 475 aa10.48□□□□□ -0.73
CALD1-210ENST00000443197 PRPF18Q99633 342 aaKnown RBP10.48□□□□□ -0.73
CALD1-210ENST00000443197 PCDHAC1Q9H158 963 aa10.48□□□□□ -0.73
CALD1-210ENST00000443197 NOL6Q9H6R4 1146 aaKnown RBP10.48□□□□□ -0.73
CALD1-210ENST00000443197 PCDH12Q9NPG4 1184 aa10.48□□□□□ -0.73
CALD1-210ENST00000443197 KCTD5Q9NXV2 234 aa10.48□□□□□ -0.73
CALD1-210ENST00000443197 LIMD1Q9UGP4 676 aa10.48□□□□□ -0.73
CALD1-210ENST00000443197 MTF2Q9Y483 593 aaPredicted RBP10.48□□□□□ -0.73
CALD1-210ENST00000443197 GRXCR1A8MXD5 290 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 FFAR2O15552 330 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 SLC22A3O75751 556 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 HSPA1AP0DMV8 641 aaKnown RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 HSPA1BP0DMV9 641 aaKnown RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 CTSAP10619 480 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 ACADMP11310 421 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 MAT2AP31153 395 aaKnown RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 S100A3P33764 101 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 MAGEA3P43357 314 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 HMGCS1Q01581 520 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 CHRNB3Q05901 458 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 GCNT7Q6ZNI0 430 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 PIANPQ8IYJ0 282 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 TCEAL8Q8IYN2 117 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 SCML4Q8N228 414 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 SLC7A6OSQ96CW6 309 aaPredicted RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 PPP1R16AQ96I34 528 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 NSMCE2Q96MF7 247 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 RIOK2Q9BVS4 552 aaKnown RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 SLC46A2Q9BY10 475 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 AKTIPQ9H8T0 292 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 NLE1Q9NVX2 485 aaPredicted RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 NMRK1Q9NWW6 199 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 EURLQ9NYK6 297 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 KIF17Q9P2E2 1029 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 ZNF212Q9UDV6 495 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 G3V2L1 256 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 LDB2O43679 373 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 EFNA1P20827 205 aaPredicted RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 HOXC8P31273 242 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 NSG1P42857 185 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 GTF2H2Q13888 395 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 GTF2H2CQ6P1K8 395 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 EPGNQ6UW88 154 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 CD300LGQ6UXG3 332 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 FBXO30Q8TB52 745 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 WBP2Q969T9 261 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 MAGED4Q96JG8 741 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 APOLD1Q96LR9 279 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 TSC22D3Q99576 134 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 BOCQ9BWV1 1114 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 TFB2MQ9H5Q4 396 aaKnown RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 HPS4Q9NQG7 708 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 WARS2Q9UGM6 360 aaKnown RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 TMEM247A6NEH6 219 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 DRGXA6NNA5 263 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 RNASEH2AO75792 299 aaKnown RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 PGLSO95336 258 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 NFATC1O95644 943 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 FTH1P02794 183 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 RIPK1Q13546 671 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 ZNF648Q5T619 568 aaPredicted RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 PPP2R2DQ66LE6 453 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 TMEM220Q6QAJ8 160 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 TRIM74Q86UV6 250 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 OR13J1Q8NGT2 312 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 MZB1Q8WU39 189 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 TRIM4Q9C037 500 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 POMPQ9Y244 141 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 AP4S1Q9Y587 144 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 TRBV23OR9-2A0A075B6M9 112 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 C1QTNF3-AMACRE9PGA6 284 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 TRIM24O15164 1050 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 TBX10O75333 385 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 VPS4BO75351 444 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 PRIM2P49643 509 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 ERVFC1P60507 584 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 CDC16Q13042 620 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 LYPLAL1Q5VWZ2 237 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 DENND5AQ6IQ26 1287 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 KIAA1324Q6UXG2 1013 aaKnown RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 BEND7Q8N7W2 519 aaPredicted RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 MDGA1Q8NFP4 955 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 TOX2Q96NM4 488 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 CCDC28BQ9BUN5 200 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 CORO1CQ9ULV4 474 aaPredicted RBP10.47□□□□□ -0.73
CALD1-210ENST00000443197 SNX8Q9Y5X2 465 aa10.47□□□□□ -0.73
CALD1-210ENST00000443197 H3BM21 787 aa10.46□□□□□ -0.73
CALD1-210ENST00000443197 CA3P07451 260 aa10.46□□□□□ -0.73
CALD1-210ENST00000443197 IDO1P14902 403 aa10.46□□□□□ -0.73
CALD1-210ENST00000443197 KCNA5P22460 613 aa10.46□□□□□ -0.73
CALD1-210ENST00000443197 ILF2Q12905 390 aaKnown RBP10.46□□□□□ -0.73
CALD1-210ENST00000443197 GRM2Q14416 872 aa10.46□□□□□ -0.73
CALD1-210ENST00000443197 TECRLQ5HYJ1 363 aa10.46□□□□□ -0.73
CALD1-210ENST00000443197 DHDDSQ86SQ9 333 aa10.46□□□□□ -0.73
CALD1-210ENST00000443197 KLF16Q9BXK1 252 aaPredicted RBP10.46□□□□□ -0.73
CALD1-210ENST00000443197 TBC1D3DA0A087WVF3 549 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TBC1D3IA0A087WXS9 549 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TBC1D3EA0A087X179 549 aa10.46□□□□□ -0.74
CALD1-210ENST00000443197 TBC1D3KA0A087X1G2 549 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms