RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CD68P34810 354 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 HNF1BP35680 557 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 PGM1P36871 562 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 MTTPP55157 894 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 CLDN2P57739 230 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 RPS14P62263 151 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 RACK1P63244 317 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 FASTKD1Q53R41 847 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 THEMIS2Q5TEJ8 643 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 NAPEPLDQ6IQ20 393 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 TMEM154Q6P9G4 183 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 PHTF2Q8N3S3 785 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 CPSF7Q8N684 471 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 FRMD1Q8N878 549 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 OR2I1PQ8NGU4 316 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 HMGCLL1Q8TB92 370 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 RNF217Q8TC41 542 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 PIWIL2Q8TC59 973 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 GPR78Q96P69 363 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 DCBLD2Q96PD2 775 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 WDR26Q9H7D7 661 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 CYP4F12Q9HCS2 524 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 BFARQ9NZS9 450 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 TMEM216Q9P0N5 145 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 APOBEC3BQ9UH17 382 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 KLHL3Q9UH77 587 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 PCDHGB4Q9UN71 923 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 PCDHGB5Q9Y5G0 923 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 A0A0A0MRY4 1105 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 UBA6A0AVT1 1052 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 UPK3BL1B0FP48 263 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 HACD1B0YJ81 288 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 UPK3BL2E5RIL1 263 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 FAM72CH0Y354 149 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 NRG2O14511 850 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 PEX1O43933 1283 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 MFSD11O43934 449 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 KRT37O76014 449 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 LDOC1O95751 146 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 TNFP01375 233 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 ACTR1BP42025 376 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 CPA2P48052 419 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 SERPINB9P50453 376 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 ACTR1AP61163 376 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 GAS6Q14393 721 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 SYTL3Q4VX76 610 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 PPM1JQ5JR12 505 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 FAM72AQ5TYM5 149 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 FAM72DQ6L9T8 149 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 C8orf82Q6P1X6 216 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 Q6ZNB5 142 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 LRRC69Q6ZNQ3 347 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 FAM72BQ86X60 149 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 NRSN1Q8IZ57 195 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 LSMEM2Q8N112 164 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 SH3KBP1Q96B97 665 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 BIRC7Q96CA5 298 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 LOXL4Q96JB6 756 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 PRICKLE1Q96MT3 831 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC6A18Q96N87 628 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 SPATA13Q96N96 652 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 LGMNQ99538 433 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZDHHC5Q9C0B5 715 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 NDFIP2Q9NV92 336 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 WSB2Q9NYS7 404 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 COPG2Q9UBF2 871 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 CD84Q9UIB8 345 aa7.32□□□□□ -1.24
CDC42BPA-208ENST00000442054 KLHL33A6NCF5 533 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 TTC36A6NLP5 189 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 METTL12A8MUP2 240 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 B4DGG1 531 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ARHGAP33O14559 1287 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 INSIG1O15503 277 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 USP1O94782 785 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 WISP3O95389 354 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 APRTP07741 180 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ESRRAP11474 423 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ADRB3P13945 408 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 MSH3P20585 1137 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 CES1P23141 567 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 P2RY2P41231 377 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 TBL3Q12788 808 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 TMEM164Q5U3C3 297 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 C16orf46Q6P387 395 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 FRMD7Q6ZUT3 714 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 OOSP2Q86WS3 158 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 CCNJLQ8IV13 435 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 C10orf107Q8IVU9 208 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ETFBKMTQ8IXQ9 262 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 CXorf40BQ96DE9 158 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 WWP1Q9H0M0 922 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ITM2CQ9NQX7 267 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 PCMTD2Q9NV79 361 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 PNPOQ9NVS9 261 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 ARHGEF38Q9NXL2 777 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 TSR3Q9UJK0 312 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 DMTF1Q9Y222 760 aa7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 AAR2Q9Y312 384 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-208ENST00000442054 IKBKGQ9Y6K9 419 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms