RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 KCNJ1P48048 391 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 CCR5P51681 352 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 SGSHP51688 502 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 AIF1P55008 147 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 GBE1Q04446 702 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 SLC10A2Q12908 348 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-206ENST00000441089 SRSF6Q13247 344 aaKnown RBP4.8□□□□□ -1.64
PTPN4-206ENST00000441089 ZNF234Q14588 700 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 ALFQ53S48 1182 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 FAM133BQ5BKY9 247 aaKnown RBP4.8□□□□□ -1.64
PTPN4-206ENST00000441089 TEX35Q5T0J7 233 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 CCDC181Q5TID7 509 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 RAP1GAP2Q684P5 730 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 NAPEPLDQ6IQ20 393 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 FBXL22Q6P050 247 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 MYO7BQ6PIF6 2116 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 HTR3DQ70Z44 454 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 B4GALNT4Q76KP1 1039 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 RAB11FIP2Q7L804 512 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 PRUNE1Q86TP1 453 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 CTAGE6Q86UF2 777 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 VASH2Q86V25 355 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 NLRP14Q86W24 1093 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 CIR1Q86X95 450 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-206ENST00000441089 CTAGE4Q8IX94 777 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 KLHL7Q8IXQ5 586 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 SLC25A45Q8N413 288 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 FBXO39Q8N4B4 442 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 NPWQ8N729 165 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 GLIS1Q8NBF1 620 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 MNS1Q8NEH6 495 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 MYRIPQ8NFW9 859 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 OR2T34Q8NGX1 318 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 SLC35B2Q8TB61 432 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 ACTL9Q8TC94 416 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 GANCQ8TET4 914 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 RNF34Q969K3 372 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 ARRDC3Q96B67 414 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 SERAC1Q96JX3 654 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 APOLD1Q96LR9 279 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 PRICKLE1Q96MT3 831 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-206ENST00000441089 CDK5RAP1Q96SZ6 601 aaKnown RBP4.8□□□□□ -1.64
PTPN4-206ENST00000441089 KRT12Q99456 494 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 LRRC1Q9BTT6 524 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 SLC12A9Q9BXP2 914 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 CALN1Q9BXU9 219 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 STRADBQ9C0K7 418 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 PRDM14Q9GZV8 571 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 SIK2Q9H0K1 926 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 DDX47Q9H0S4 455 aaKnown RBP4.8□□□□□ -1.64
PTPN4-206ENST00000441089 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.8□□□□□ -1.64
PTPN4-206ENST00000441089 ELOVL2Q9NXB9 296 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 NLGN3Q9NZ94 848 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 RCOR3Q9P2K3 495 aaPredicted RBP4.8□□□□□ -1.64
PTPN4-206ENST00000441089 ZNF212Q9UDV6 495 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 OR12D3Q9UGF7 316 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 LSM7Q9UK45 103 aaKnown RBP4.8□□□□□ -1.64
PTPN4-206ENST00000441089 AGO1Q9UL18 857 aaKnown RBP4.8□□□□□ -1.64
PTPN4-206ENST00000441089 EFR3BQ9Y2G0 817 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 NEU2Q9Y3R4 380 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 HBS1LQ9Y450 684 aaKnown RBP4.8□□□□□ -1.64
PTPN4-206ENST00000441089 TLN2Q9Y4G6 2542 aa4.8□□□□□ -1.64
PTPN4-206ENST00000441089 FER1L5A0AVI2 2057 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 IGLV3-10A0A075B6K4 115 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 TMEM82A0PJX8 343 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 PMS2P1A4D2B8 440 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ZSCAN5CA6NGD5 496 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 DRGXA6NNA5 263 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 EFCAB7A8K855 629 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 EFCAB8A8MWE9 144 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 CCDC188H7C350 402 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 APOC4-APOC2K7ER74 178 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 HRKO00198 91 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 EEF2KO00418 725 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 APOL1O14791 398 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 FFAR2O15552 330 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 CTIFO43310 598 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 RAD51CO43502 376 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 LIASO43766 372 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ACSL4O60488 711 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 TJP3O95049 919 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 LDLRP01130 860 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 APOEP02649 317 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 APOC2P02655 101 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 JMJD7P0C870 316 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ZSCAN5DPP0CG00 497 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 SLC2A3P11169 496 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 VAV1P15498 845 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 TNFRSF1AP19438 455 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 TACR2P21452 398 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 PRKCHP24723 683 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 EPHB2P29323 1055 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 UGT1A5P35504 534 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 COILP38432 576 aaPredicted RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 ARL4AP40617 200 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 HCAR3P49019 387 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 TPI1P60174 286 aa4.79□□□□□ -1.64
PTPN4-206ENST00000441089 RPS14P62263 151 aaKnown RBP4.79□□□□□ -1.64
PTPN4-206ENST00000441089 COG7P83436 770 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms