RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 RCBTB1Q8NDN9 531 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 OR52K1Q8NGK4 314 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 OR10G6Q8NH81 332 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 CRELD1Q96HD1 420 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 DNAJC1Q96KC8 554 aaKnown RBP13.52□□□□□ -0.25
LTBR-202ENST00000440421 CCDC74BQ96LY2 380 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 SARS2Q9NP81 518 aaKnown RBP13.52□□□□□ -0.25
LTBR-202ENST00000440421 TMEM9Q9P0T7 183 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 CPNE7Q9UBL6 633 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 PISDQ9UG56 409 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 CRLS1Q9UJA2 301 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 URB1O60287 2271 aaKnown RBP13.52□□□□□ -0.25
LTBR-202ENST00000440421 ZZEF1O43149 2961 aa13.52□□□□□ -0.25
LTBR-202ENST00000440421 PKD1L2Q7Z442 2459 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 ADAMTS20P59510 1910 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 IGHV5-10-1A0A0J9YXX1 117 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 POP7O75817 140 aaKnown RBP13.51□□□□□ -0.25
LTBR-202ENST00000440421 ZSCAN5DPP0CG00 497 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 ITIH1P19827 911 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 MC4RP32245 332 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 FDFT1P37268 417 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 HADHAP40939 763 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 ABCG1P45844 678 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 CFHR1Q03591 330 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 C16orf72Q14CZ0 275 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 LONRF2Q1L5Z9 754 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 IGF2-ASQ6U949 168 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 PPP1R21Q6ZMI0 780 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 LINC00523Q86TU6 105 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 AMZ2Q86W34 360 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 JAMLQ86YT9 394 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 BEND7Q8N7W2 519 aaPredicted RBP13.51□□□□□ -0.25
LTBR-202ENST00000440421 DNAAF3Q8N9W5 541 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 ZNF248Q8NDW4 579 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 SH3KBP1Q96B97 665 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 SGF29Q96ES7 293 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 CCDC97Q96F63 343 aaPredicted RBP13.51□□□□□ -0.25
LTBR-202ENST00000440421 CMKLR1Q99788 373 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 TBC1D10AQ9BXI6 508 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 RAB6BQ9NRW1 208 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 ZNF624Q9P2J8 865 aaPredicted RBP13.51□□□□□ -0.25
LTBR-202ENST00000440421 FAM8A1Q9UBU6 413 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 SLC30A1Q9Y6M5 507 aa13.51□□□□□ -0.25
LTBR-202ENST00000440421 ANKRD11Q6UB99 2663 aaPredicted RBP13.51□□□□□ -0.25
LTBR-202ENST00000440421 PRAMEF33A0A0G2JMD5 474 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 PRR19A6NJB7 356 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 OR52A4PA6NMU1 304 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 CDRT15L2A8MXV6 281 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 DUX1O43812 170 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 VIPP01282 170 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 ITGA2BP08514 1039 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 BRAFP15056 766 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 ITGALP20701 1170 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 RPL22P35268 128 aaKnown RBP13.5□□□□□ -0.25
LTBR-202ENST00000440421 ETV5P41161 510 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 SLC19A1P41440 591 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 GRIA1P42261 906 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 CDKN1CP49918 316 aaPredicted RBP13.5□□□□□ -0.25
LTBR-202ENST00000440421 LIMK2P53671 638 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 MAPK10P53779 464 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 UBE2IP63279 158 aaKnown RBP13.5□□□□□ -0.25
LTBR-202ENST00000440421 GPLD1P80108 840 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 NFE2L1Q14494 772 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 CLPPQ16740 277 aaPredicted RBP13.5□□□□□ -0.25
LTBR-202ENST00000440421 KCTD19Q17RG1 926 aaPredicted RBP13.5□□□□□ -0.25
LTBR-202ENST00000440421 CCDC38Q502W7 563 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 ZRANB3Q5FWF4 1079 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 SNAP47Q5SQN1 464 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 ABRAXAS1Q6UWZ7 409 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 FAM83HQ6ZRV2 1179 aaPredicted RBP13.5□□□□□ -0.25
LTBR-202ENST00000440421 GSTA5Q7RTV2 222 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 SNX20Q7Z614 316 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 SPACA3Q8IXA5 215 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 OR4D9Q8NGE8 314 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 MAIP1Q8WWC4 291 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 KCNE4Q8WWG9 221 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 ULK4Q96C45 1275 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 DCUN1D1Q96GG9 259 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.5□□□□□ -0.25
LTBR-202ENST00000440421 NLE1Q9NVX2 485 aaPredicted RBP13.5□□□□□ -0.25
LTBR-202ENST00000440421 PAK5Q9P286 719 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 PSMD13Q9UNM6 376 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 WDR37Q9Y2I8 494 aa13.5□□□□□ -0.25
LTBR-202ENST00000440421 ERI2A8K979 691 aaKnown RBP13.49□□□□□ -0.25
LTBR-202ENST00000440421 A8MU76 341 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 GAS8O95995 478 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 APRTP07741 180 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 PRSS56P0CW18 603 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 XRCC1P18887 633 aaPredicted RBP13.49□□□□□ -0.25
LTBR-202ENST00000440421 SLC5A2P31639 672 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 HALP42357 657 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 KCNJ1P48048 391 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 CDH17Q12864 832 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 SQSTM1Q13501 440 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 SEMA5AQ13591 1074 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 CLCA4Q14CN2 919 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 TMEM71Q6P5X7 295 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 TAS2R42Q7RTR8 314 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 CLEC14AQ86T13 490 aa13.49□□□□□ -0.25
LTBR-202ENST00000440421 REXO1L1PQ8IX06 675 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms