RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 PIGFQ07326 219 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 FOXM1Q08050 763 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 DSC1Q08554 894 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 POU6F1Q14863 301 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 CTF1Q16619 201 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 PYCR3Q53H96 274 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 PTRH1Q86Y79 214 aaKnown RBP8.49□□□□□ -1.05
HPS4-206ENST00000439453 SLC22A9Q8IVM8 553 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 MFSD4AQ8N468 514 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 HDAC2Q92769 488 aaKnown RBP8.49□□□□□ -1.05
HPS4-206ENST00000439453 CHID1Q9BWS9 393 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 PCDH12Q9NPG4 1184 aa8.49□□□□□ -1.05
HPS4-206ENST00000439453 F8W810 466 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 HTR1AP08908 422 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 THRBP10828 461 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 CPB1P15086 417 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 PBX3P40426 434 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 ALDH3A2P51648 485 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 DAG1Q14118 895 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 IMPG1Q17R60 797 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 TIGD2Q4W5G0 525 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 RABL3Q5HYI8 236 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 RBM20Q5T481 1227 aaKnown RBP8.48□□□□□ -1.05
HPS4-206ENST00000439453 DNAJC14Q6Y2X3 702 aaPredicted RBP8.48□□□□□ -1.05
HPS4-206ENST00000439453 KIAA0408Q6ZU52 694 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 SLC22A16Q86VW1 577 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 C8orf59Q8N0T1 100 aaPredicted RBP8.48□□□□□ -1.05
HPS4-206ENST00000439453 ZCCHC7Q8N3Z6 543 aaKnown RBP8.48□□□□□ -1.05
HPS4-206ENST00000439453 NPWQ8N729 165 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 NAT16Q8N8M0 369 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 DNAJB14Q8TBM8 379 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 MYLIPQ8WY64 445 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 BIRC7Q96CA5 298 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 KIF12Q96FN5 646 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 NDEL1Q9GZM8 345 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 SNTG2Q9NY99 539 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.48□□□□□ -1.05
HPS4-206ENST00000439453 IFT52Q9Y366 437 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 A0A0C4DFX4 3053 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 M0QYT0 321 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 PPEF2O14830 753 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 NCAM2O15394 837 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 NDUFB5O43674 189 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 HUS1O60921 280 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 SUPT7LO94864 414 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 JCHAINP01591 159 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 RBP1P09455 135 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 LTA4HP09960 611 aaKnown RBP8.48□□□□□ -1.05
HPS4-206ENST00000439453 BMP4P12644 408 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 IMPDH1P20839 514 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 GRB7Q14451 532 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 ARL13BQ3SXY8 428 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 ZNF470Q6ECI4 717 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 CD300LGQ6UXG3 332 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 LINC00299Q6ZSB3 139 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 OTOP3Q7RTS5 596 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 SCML4Q8N228 414 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 C2CD4AQ8NCU7 369 aaPredicted RBP8.48□□□□□ -1.05
HPS4-206ENST00000439453 TEKT5Q96M29 485 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 RNF145Q96MT1 663 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 ZBED2Q9BTP6 218 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 TRMOQ9BU70 441 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 TRIM54Q9BYV2 358 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 SLC28A3Q9HAS3 691 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 CACNG4Q9UBN1 327 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 SLC2A6Q9UGQ3 507 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 PTGDR2Q9Y5Y4 395 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 H3BNC9 293 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 DEAF1O75398 565 aaPredicted RBP8.48□□□□□ -1.05
HPS4-206ENST00000439453 DAB1O75553 588 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 TPI1P60174 286 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 ECT2LQ008S8 904 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 NFYCQ13952 458 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 DPY19L1Q2PZI1 675 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 PAGE2BQ5JRK9 111 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 BPIFB1Q8TDL5 484 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 UBXN10Q96LJ8 280 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 NTN4Q9HB63 628 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 POLE4Q9NR33 117 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 MARCH5Q9NX47 278 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 FBXO5Q9UKT4 447 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 PDE10AQ9Y233 779 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 AURKAO14965 403 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 AXIN1O15169 862 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 PSMD3O43242 534 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 RECQL4O94761 1208 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 INMTO95050 263 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 ALPLP05186 524 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 ITGB1P05556 798 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 BMPR1AP36894 532 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 GABARAPL2P60520 117 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 RPS6KA2Q15349 733 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 FUT11Q495W5 492 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 AASDHQ4L235 1098 aaPredicted RBP8.48□□□□□ -1.05
HPS4-206ENST00000439453 C6orf141Q5SZD1 244 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 DCP1BQ8IZD4 617 aaKnown RBP8.48□□□□□ -1.05
HPS4-206ENST00000439453 CLYBLQ8N0X4 340 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 CLEC4FQ8N1N0 589 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 PIK3C3Q8NEB9 887 aa8.48□□□□□ -1.05
HPS4-206ENST00000439453 HDAC11Q96DB2 347 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms