RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 PLEKHG4BQ96PX9 1271 aa16.23■□□□□ 0.19
CLCNKA-203ENST00000439316 GPR21Q99679 349 aa16.23■□□□□ 0.19
CLCNKA-203ENST00000439316 OSBPL6Q9BZF3 934 aa16.23■□□□□ 0.19
CLCNKA-203ENST00000439316 CCDC68Q9H2F9 335 aa16.23■□□□□ 0.19
CLCNKA-203ENST00000439316 TMEM45AQ9NWC5 275 aa16.23■□□□□ 0.19
CLCNKA-203ENST00000439316 ZNHIT2Q9UHR6 403 aa16.23■□□□□ 0.19
CLCNKA-203ENST00000439316 ZFC3H1O60293 1989 aaKnown RBP16.23■□□□□ 0.19
CLCNKA-203ENST00000439316 CHD5Q8TDI0 1954 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 SLC12A8A0AV02 714 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 FAM234BA2RU67 622 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 SNX2O60749 519 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 SOAT2O75908 522 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 SEC24DO94855 1032 aaPredicted RBP16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 CLIC3O95833 236 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 LDLRP01130 860 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 ALDH2P05091 517 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 HMBSP08397 361 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 HRH2P25021 359 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 HTR1EP28566 365 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 AGTR2P50052 363 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 CNKSR3Q6P9H4 555 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 LYSMD3Q7Z3D4 306 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 TTC9BQ8N6N2 239 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 ZNF420Q8TAQ5 688 aaPredicted RBP16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 OSCP1Q8WVF1 389 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 FBXO32Q969P5 355 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 DOK1Q99704 481 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 TMEM106CQ9BVX2 250 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 RPF2Q9H7B2 306 aaKnown RBP16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 PCDHB5Q9Y5E4 795 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 hCG_2014768A0A024R1R8 64 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 GRXCR2A6NFK2 248 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 BTN3A1O00481 513 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 TSPAN12O95859 305 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 ENO2P09104 434 aaPredicted RBP16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 HOXD9P28356 352 aaPredicted RBP16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 TTKP33981 857 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 SLC11A1P49279 550 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 EMX2Q04743 252 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 RING1Q06587 406 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 TIGD2Q4W5G0 525 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 C10orf120Q5SQS8 335 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 NANOGP8Q6NSW7 305 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 UGT3A1Q6NUS8 523 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 KLHL35Q6PF15 583 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 NECAB2Q7Z6G3 386 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 CROCCP3Q8IVE0 287 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 OFCC1Q8IZS5 231 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 OR56A4Q8NGH8 313 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 ISG20Q96AZ6 181 aaKnown RBP16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 RPL10LQ96L21 214 aaKnown RBP16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 TMEM74Q96NL1 305 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 YTHDF1Q9BYJ9 559 aaKnown RBP16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 NANOGQ9H9S0 305 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 PLGRKTQ9HBL7 147 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 PFDN4Q9NQP4 134 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 INTS7Q9NVH2 962 aaKnown RBP16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 CDC14AQ9UNH5 594 aa16.22■□□□□ 0.19
CLCNKA-203ENST00000439316 TRIM43BA6NCK2 446 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 NT5C1B-RDH14C9J2C7 533 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 PFDN1O60925 122 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 NDUFS3O75489 264 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 NPPAP01160 153 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 TACR2P21452 398 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 DCKP27707 260 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 IL12AP29459 219 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 STT3AP46977 705 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 ADARB1P78563 741 aaKnown RBP16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 TAF1AQ15573 450 aaPredicted RBP16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 RBBP7Q16576 425 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 FUT11Q495W5 492 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 PROSER1Q86XN7 944 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 LRRC43Q8N309 656 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 OR4K2Q8NGD2 314 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 FNDC8Q8TC99 324 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 BPIFB1Q8TDL5 484 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 GPR152Q8TDT2 470 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 TRIM43Q96BQ3 446 aaPredicted RBP16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 BIRC7Q96CA5 298 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 NSMCE3Q96MG7 304 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 HGH1Q9BTY7 390 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 C1orf50Q9BV19 199 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 MRPL9Q9BYD2 267 aaKnown RBP16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 CXorf21Q9HAI6 301 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 RIC8BQ9NVN3 520 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 SLAMF8Q9P0V8 285 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 GALPQ9UBC7 116 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 USP22Q9UPT9 525 aa16.21■□□□□ 0.19
CLCNKA-203ENST00000439316 NCF1BA6NI72 391 aaPredicted RBP16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 NCF1CA8MVU1 366 aaPredicted RBP16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 NCF1P14598 390 aaPredicted RBP16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 CD9P21926 228 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 HK3P52790 923 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 PMS2P3Q13401 168 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 PTPRNQ16849 979 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 GPRIN3Q6ZVF9 776 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 ZFAND4Q86XD8 727 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 BBS5Q8N3I7 341 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 DPP10Q8N608 796 aa16.2■□□□□ 0.18
CLCNKA-203ENST00000439316 B3GALT6Q96L58 329 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms