RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 HEXDCQ8WVB3 486 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 DCUN1D1Q96GG9 259 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 DNAJC1Q96KC8 554 aaKnown RBP24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 SLC46A1Q96NT5 459 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 DCBLD2Q96PD2 775 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 CMKLR1Q99788 373 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 ZMYND15Q9H091 742 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 WASH6PQ9NQA3 447 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 NLE1Q9NVX2 485 aaPredicted RBP24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 AKAP7Q9P0M2 348 aaPredicted RBP24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 CPNE7Q9UBL6 633 aa24.34■■□□□ 1.49
RAPGEF1-206ENST00000438647 PKD1L2Q7Z442 2459 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 A0A1W2PNU3 283 aaPredicted RBP24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 KLHL33A6NCF5 533 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 PRR19A6NJB7 356 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 AGAP14A8MT82 685 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 CFAP99D6REC4 459 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 H7C0S8 307 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 DUX1O43812 170 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 EIF2S3P41091 472 aaKnown RBP24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 PPM1FP49593 454 aaPredicted RBP24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 CTSCP53634 463 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 PCBP4P57723 403 aaKnown RBP24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 DMPKQ09013 629 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 GPR33Q49SQ1 333 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 PHF19Q5T6S3 580 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 AGAP9Q5VTM2 703 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 USP53Q70EK8 1073 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 TRIM48Q8IWZ4 208 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 OR52K1Q8NGK4 314 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 PBKQ96KB5 322 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 NUDT22Q9BRQ3 303 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 ASCL3Q9NQ33 180 aa24.33■■□□□ 1.49
RAPGEF1-206ENST00000438647 OR2AG2A6NM03 316 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 POP7O75817 140 aaKnown RBP24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 ITGA2BP08514 1039 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 JMJD7P0C870 316 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 ETS1P14921 441 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 XRCC1P18887 633 aaPredicted RBP24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 MC4RP32245 332 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 CA5AP35218 305 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 EPHA4P54764 986 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 SEPT7Q16181 437 aaKnown RBP24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 SKIDA1Q1XH10 827 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 ABRAXAS1Q6UWZ7 409 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 NXPE1Q8N323 547 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 ZNF248Q8NDW4 579 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 OR4D9Q8NGE8 314 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 PRR11Q96HE9 360 aaPredicted RBP24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 COPS8Q99627 209 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 EPB41L1Q9H4G0 881 aa24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 PIH1D1Q9NWS0 290 aaKnown RBP24.32■■□□□ 1.48
RAPGEF1-206ENST00000438647 TNFSF15O95150 251 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 VIPP01282 170 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 APRTP07741 180 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 HALP42357 657 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 UBE2IP63279 158 aaKnown RBP24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 TRA2AQ13595 282 aaKnown RBP eCLIP24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 FNBP1LQ5T0N5 605 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 NKAIN2Q5VXU1 208 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 TMPRSS9Q7Z410 1059 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 ZNF761Q86XN6 746 aaPredicted RBP24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 REXO1L1PQ8IX06 675 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 NAP1L3Q99457 506 aaPredicted RBP24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 KCNF1Q9H3M0 494 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 SEMA6CQ9H3T2 930 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 UCK1Q9HA47 277 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 POT1Q9NUX5 634 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 LOXL2Q9Y4K0 774 aa24.31■■□□□ 1.48
RAPGEF1-206ENST00000438647 HEATR9A2RTY3 570 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 MROH6A6NGR9 719 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 LILRA5A6NI73 299 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 HGSO14964 777 aaPredicted RBP24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 KIF5CO60282 957 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 RPL10P27635 214 aaKnown RBP24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 RPL22P35268 128 aaKnown RBP24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 LIMK2P53671 638 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 KIF26BQ2KJY2 2108 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 ZRANB3Q5FWF4 1079 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 DET1Q7L5Y6 550 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 PRUNE1Q86TP1 453 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 RBM12BQ8IXT5 1001 aaKnown RBP24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 GLIS1Q8NBF1 620 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 SGF29Q96ES7 293 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 CDKN2AIPNLQ96HQ2 116 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 EIF2B3Q9NR50 452 aaKnown RBP24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 SCHIP1Q9P0W5 487 aaPredicted RBP24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 CFAP47Q6ZTR5 3102 aa24.3■■□□□ 1.48
RAPGEF1-206ENST00000438647 DSPP15924 2871 aaKnown RBP24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 IGHV5-10-1A0A0J9YXX1 117 aa24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 CDRT15L2A8MXV6 281 aa24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 CCL22O00626 93 aa24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 ZSCAN5DPP0CG00 497 aa24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 DRG2P55039 364 aaKnown RBP24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 BCL7AQ4VC05 210 aa24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 TMEM71Q6P5X7 295 aa24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 CLEC14AQ86T13 490 aa24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 RASGEF1CQ8N431 466 aa24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 PRELID2Q8N945 189 aa24.29■■□□□ 1.48
RAPGEF1-206ENST00000438647 CXorf40BQ96DE9 158 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms