RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 TRIM38O00635 465 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 LYNP07948 512 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 ANXA4P09525 319 aaPredicted RBP10.25□□□□□ -0.77
SHPRH-206ENST00000438092 COL6A1P12109 1028 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 GNSP15586 552 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 FASTKD3Q14CZ7 662 aaKnown RBP10.25□□□□□ -0.77
SHPRH-206ENST00000438092 MEA1Q16626 185 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 VSTM1Q6UX27 236 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 DHDDSQ86SQ9 333 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 AGXT2Q9BYV1 514 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 TMEM27Q9HBJ8 222 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 CCDC177Q9NQR7 707 aaPredicted RBP10.25□□□□□ -0.77
SHPRH-206ENST00000438092 PDP1Q9P0J1 537 aaPredicted RBP10.25□□□□□ -0.77
SHPRH-206ENST00000438092 CDH7Q9ULB5 785 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 TFECO14948 347 aaPredicted RBP10.25□□□□□ -0.77
SHPRH-206ENST00000438092 INSIG1O15503 277 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 TM7SF2O76062 418 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 DDX6P26196 483 aaKnown RBP eCLIP10.25□□□□□ -0.77
SHPRH-206ENST00000438092 KCNJ5P48544 419 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 ATP6V0D1P61421 351 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 FKBP1BP68106 108 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 CACNG1Q06432 222 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 TAB1Q15750 504 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 VPS26BQ4G0F5 336 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 ESRP1Q6NXG1 681 aaKnown RBP10.25□□□□□ -0.77
SHPRH-206ENST00000438092 C1orf127Q8N9H9 656 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 TWIST2Q8WVJ9 160 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 CLCC1Q96S66 551 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 FAM192AQ9GZU8 254 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 PLEKHA1Q9HB21 404 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 HCN3Q9P1Z3 774 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 PCYOX1Q9UHG3 505 aa10.25□□□□□ -0.77
SHPRH-206ENST00000438092 KHNYNO15037 678 aaKnown RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 DNASE1L1P49184 302 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 STARP49675 285 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 RGS8P57771 180 aaPredicted RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 PPP1R15BQ5SWA1 713 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 UBAP2Q5T6F2 1119 aaKnown RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 ABRAXAS1Q6UWZ7 409 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 LIX1Q8N485 282 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 GKN1Q9NS71 199 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 ING3Q9NXR8 418 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 FKBPLQ9UIM3 349 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 C3orf18Q9UK00 162 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 LRCH1Q9Y2L9 728 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 COL1A2P08123 1366 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 HDAC3O15379 428 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 BIRC5O15392 142 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 CLDN9O95484 217 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 POLR2JP52435 117 aaKnown RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 CHAF1BQ13112 559 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 LARS2Q15031 903 aaKnown RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 BROXQ5VW32 411 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 GALNT7Q86SF2 657 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 TSTD1Q8NFU3 115 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 MFSD3Q96ES6 412 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 HSD17B14Q9BPX1 270 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 HEPHQ9BQS7 1158 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 LMTK2Q8IWU2 1503 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 SOWAHBA6NEL2 793 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 C4BPAP04003 597 aaKnown RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 FPGSQ05932 587 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 GRM3Q14832 879 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 NAIF1Q69YI7 327 aaPredicted RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 NEK5Q6P3R8 708 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 FBXO42Q6P3S6 717 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 DEPDC4Q8N2C3 294 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 SH3RF2Q8TEC5 729 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 STYXQ8WUJ0 223 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 SLC25A36Q96CQ1 311 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 CLPTM1LQ96KA5 538 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 ZFRQ96KR1 1074 aaKnown RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 TBC1D10AQ9BXI6 508 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 OR51V1Q9H2C8 321 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 C11orf49Q9H6J7 331 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 POLR3BQ9NW08 1133 aaPredicted RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 MED31Q9Y3C7 131 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 UBE2QL1A1L167 161 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 PRR5-ARHGAP8B1AHC4 643 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 BTN3A3O00478 584 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 SHOX2O60902 331 aaPredicted RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 RSL1D1O76021 490 aaKnown RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 SLC35G6P0C7Q6 338 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 ACP5P13686 325 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 ADSSP30520 456 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 STAT5AP42229 794 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 GDI2P50395 445 aaKnown RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 ARHGAP8P85298 464 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 PUS10Q3MIT2 529 aaKnown RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 SH3PXD2AQ5TCZ1 1133 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 MLIPQ5VWP3 458 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 MED27Q6P2C8 311 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 ZNF598Q86UK7 904 aaKnown RBP10.24□□□□□ -0.77
SHPRH-206ENST00000438092 LRRC49Q8IUZ0 686 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 CPNE9Q8IYJ1 553 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 FATE1Q969F0 183 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 TBX5Q99593 518 aa10.24□□□□□ -0.77
SHPRH-206ENST00000438092 SAR1AQ9NR31 198 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms