RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 TAOK1Q7L7X3 1001 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 RD3Q7Z3Z2 195 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 STRA8Q7Z7C7 330 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 LDB1Q86U70 411 aaPredicted RBP13.3□□□□□ -0.28
EXT1-203ENST00000437196 SPATS2Q86XZ4 545 aaKnown RBP13.3□□□□□ -0.28
EXT1-203ENST00000437196 HID1Q8IV36 788 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 PHACTR4Q8IZ21 702 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 FSTL5Q8N475 847 aaPredicted RBP13.3□□□□□ -0.28
EXT1-203ENST00000437196 PPM1NQ8N819 430 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 RASGEF1AQ8N9B8 481 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 HNRNPLLQ8WVV9 542 aaKnown RBP13.3□□□□□ -0.28
EXT1-203ENST00000437196 LPGAT1Q92604 370 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 LINC00615Q96LM1 132 aaPredicted RBP13.3□□□□□ -0.28
EXT1-203ENST00000437196 OR2M4Q96R27 311 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 FBXO6Q9NRD1 293 aaPredicted RBP13.3□□□□□ -0.28
EXT1-203ENST00000437196 SPASTQ9UBP0 616 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 FETUBQ9UGM5 382 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 APOBEC3BQ9UH17 382 aaKnown RBP13.3□□□□□ -0.28
EXT1-203ENST00000437196 RABGEF1Q9UJ41 708 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 SNX11Q9Y5W9 270 aa13.3□□□□□ -0.28
EXT1-203ENST00000437196 TDRD6O60522 2096 aaKnown RBP13.29□□□□□ -0.28
EXT1-203ENST00000437196 C17orf113A0A1B0GUU1 675 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 EXOC1LA0A1B0GW35 172 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 DNAJC6O75061 913 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 AHSGP02765 367 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 INHBAP08476 426 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 PKMP14618 531 aaKnown RBP13.29□□□□□ -0.28
EXT1-203ENST00000437196 SPRP35270 261 aaPredicted RBP13.29□□□□□ -0.28
EXT1-203ENST00000437196 GNPDA1P46926 289 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 POLD2P49005 469 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 PRLHRP49683 370 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 B4GALNT1Q00973 533 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 PLOD1Q02809 727 aaPredicted RBP13.29□□□□□ -0.28
EXT1-203ENST00000437196 ILF3Q12906 894 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■■□□ 17.8
EXT1-203ENST00000437196 EIF2B5Q13144 721 aaKnown RBP13.29□□□□□ -0.28
EXT1-203ENST00000437196 SMAD1Q15797 465 aaKnown RBP13.29□□□□□ -0.28
EXT1-203ENST00000437196 CSRP2Q16527 193 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 ZNF423Q2M1K9 1284 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 KHDC1Q4VXA5 237 aaKnown RBP13.29□□□□□ -0.28
EXT1-203ENST00000437196 GRTP1Q5TC63 336 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 LGSNQ5TDP6 509 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 UGT3A1Q6NUS8 523 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 DET1Q7L5Y6 550 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 OR1E3Q8WZA6 343 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 TSACCQ96A04 125 aaPredicted RBP13.29□□□□□ -0.28
EXT1-203ENST00000437196 SGF29Q96ES7 293 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 PDXPQ96GD0 296 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 TIMM29Q9BSF4 260 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 BOCQ9BWV1 1114 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 GSDMCQ9BYG8 508 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 P2RY12Q9H244 342 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 CRYL1Q9Y2S2 319 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 GPSM3Q9Y4H4 160 aa13.29□□□□□ -0.28
EXT1-203ENST00000437196 NEMP2A6NFY4 417 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 OR2AG2A6NM03 316 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 E5RI56 91 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 OR1I1O60431 355 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 HAUS5O94927 633 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 FMO4P31512 558 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 CA5AP35218 305 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 HSD17B3P37058 310 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 MSH2P43246 934 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 SERPINB9P50453 376 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 CCT8P50990 548 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 IRX4P78413 519 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 MPP1Q00013 466 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 INSCQ1MX18 579 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 HLA-BQ31612 363 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 TPRG1LQ5T0D9 272 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 ZNF648Q5T619 568 aaPredicted RBP13.28□□□□□ -0.28
EXT1-203ENST00000437196 AMZ2Q86W34 360 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 CLDN19Q8N6F1 224 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 KCNJ9Q92806 393 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 CCM2Q9BSQ5 444 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 RHOJQ9H4E5 214 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 GAREM1Q9H706 876 aa13.28□□□□□ -0.28
EXT1-203ENST00000437196 MRPL40Q9NQ50 206 aaKnown RBP13.28□□□□□ -0.28
EXT1-203ENST00000437196 LRP4O75096 1905 aa13.27□□□□□ -0.28
EXT1-203ENST00000437196 EP300Q09472 2414 aaPredicted RBP13.27□□□□□ -0.29
EXT1-203ENST00000437196 RIF1Q5UIP0 2472 aaKnown RBP13.27□□□□□ -0.29
EXT1-203ENST00000437196 A0A1B0GTQ1 180 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 MGAT4DA6NG13 374 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 PATE3B3GLJ2 98 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 VPS26AO75436 327 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 ZNF883P0CG24 379 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 ENGP17813 658 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 CHRM3P20309 590 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 CNTFP26441 200 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 SKIV2L2P42285 1042 aaKnown RBP13.27□□□□□ -0.29
EXT1-203ENST00000437196 CLCNKAP51800 687 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 CTSCP53634 463 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 SLC12A2P55011 1212 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 NHLH1Q02575 133 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 IFFO1Q0D2I5 559 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 SUZ12Q15022 739 aaKnown RBP13.27□□□□□ -0.29
EXT1-203ENST00000437196 TMED2Q15363 201 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 PRRT3Q5FWE3 981 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 FAM45BPQ6NSW5 357 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 CRTC3Q6UUV7 619 aa13.27□□□□□ -0.29
EXT1-203ENST00000437196 CHST15Q7LFX5 561 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms