RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MYOCQ99972 504 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 LGR4Q9BXB1 951 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 FAM126AQ9BYI3 521 aaPredicted RBP22.7■■□□□ 1.22
CPSF4-204ENST00000436336 IQCGQ9H095 443 aaKnown RBP22.7■■□□□ 1.22
CPSF4-204ENST00000436336 OR2AG1Q9H205 316 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 EBF2Q9HAK2 575 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 LATS2Q9NRM7 1088 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 ATXN10Q9UBB4 475 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 MBD1Q9UIS9 605 aaPredicted RBP22.7■■□□□ 1.22
CPSF4-204ENST00000436336 DHRS7Q9Y394 339 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 OR1A2Q9Y585 309 aa22.7■■□□□ 1.22
CPSF4-204ENST00000436336 LAMTOR5O43504 91 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 TRIM16O95361 564 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 MYCLP1P12525 358 aaPredicted RBP22.69■■□□□ 1.22
CPSF4-204ENST00000436336 ZNF37AP17032 561 aaPredicted RBP22.69■■□□□ 1.22
CPSF4-204ENST00000436336 SLC36A4Q6YBV0 504 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 CDHR3Q6ZTQ4 885 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 CADM4Q8NFZ8 388 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 LKAAEAR1Q8TD35 194 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 CD200R1Q8TD46 325 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 TCP10LQ8TDR4 215 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 ZNF514Q96K75 400 aaPredicted RBP22.69■■□□□ 1.22
CPSF4-204ENST00000436336 TSNARE1Q96NA8 513 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 APOOQ9BUR5 198 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 C1QTNF1Q9BXJ1 281 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 SPATS2LQ9NUQ6 558 aaKnown RBP22.69■■□□□ 1.22
CPSF4-204ENST00000436336 GALPQ9UBC7 116 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 GRID1Q9ULK0 1009 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.69■■□□□ 1.22
CPSF4-204ENST00000436336 HS3ST3A1Q9Y663 406 aa22.69■■□□□ 1.22
CPSF4-204ENST00000436336 OR2AG2A6NM03 316 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 PRAMEF26H0Y7S4 382 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 TM9SF1O15321 606 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 MAGEC1O60732 1142 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 ZWINTO95229 277 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 ASMTLO95671 621 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 FTH1P02794 183 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 HOXC4P09017 264 aaPredicted RBP22.68■■□□□ 1.22
CPSF4-204ENST00000436336 RPA3P35244 121 aaPredicted RBP22.68■■□□□ 1.22
CPSF4-204ENST00000436336 GMPRP36959 345 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 PRLHRP49683 370 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 MPP2Q14168 576 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 PAQR3Q6TCH7 311 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 TMEM207Q6UWW9 146 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 CENPLQ8N0S6 344 aaPredicted RBP22.68■■□□□ 1.22
CPSF4-204ENST00000436336 PLD6Q8N2A8 252 aaKnown RBP22.68■■□□□ 1.22
CPSF4-204ENST00000436336 SIDT2Q8NBJ9 832 aaKnown RBP22.68■■□□□ 1.22
CPSF4-204ENST00000436336 FOXJ1Q92949 421 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 UBXN10Q96LJ8 280 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 SARS2Q9NP81 518 aaKnown RBP22.68■■□□□ 1.22
CPSF4-204ENST00000436336 GPR89AB7ZAQ6 455 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 KLHL2O95198 593 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 GPR89BP0CG08 455 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 ITGB6P18564 788 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 CTSCP53634 463 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 DMWDQ09019 674 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 BCL7AQ4VC05 210 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 TMEM220Q6QAJ8 160 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 TMEM145Q8NBT3 493 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 GIMAP7Q8NHV1 300 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 INPP5DQ92835 1189 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 BMFQ96LC9 184 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 SLC30A3Q99726 388 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 NKIRAS1Q9NYS0 192 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 KLHL42Q9P2K6 505 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 GPR34Q9UPC5 381 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 INVSQ9Y283 1065 aa22.68■■□□□ 1.22
CPSF4-204ENST00000436336 BDP1A6H8Y1 2624 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 A0A1W2PPC4 97 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 POM121BA6NF01 834 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 METTL12A8MUP2 240 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 CACNB4O00305 520 aaPredicted RBP22.67■■□□□ 1.22
CPSF4-204ENST00000436336 TOR1BO14657 336 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 DNAJC6O75061 913 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 TOP3BO95985 862 aaKnown RBP22.67■■□□□ 1.22
CPSF4-204ENST00000436336 CCDC166P0CW27 439 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 TDGF1P13385 188 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 ZNF8P17098 575 aaPredicted RBP22.67■■□□□ 1.22
CPSF4-204ENST00000436336 CLDN2P57739 230 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 TSNAXIP1Q2TAA8 658 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 TSSK4Q6SA08 328 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 GCNT7Q6ZNI0 430 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 C1orf210Q8IVY1 113 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 NKAPQ8N5F7 415 aaKnown RBP22.67■■□□□ 1.22
CPSF4-204ENST00000436336 TMEM105Q8N8V8 129 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 KCTD4Q8WVF5 259 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 ANKRD49Q8WVL7 239 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 TMEM98Q9Y2Y6 226 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 PLLPQ9Y342 182 aa22.67■■□□□ 1.22
CPSF4-204ENST00000436336 KPNA5O15131 536 aa22.66■■□□□ 1.22
CPSF4-204ENST00000436336 LTA4HP09960 611 aaKnown RBP22.66■■□□□ 1.22
CPSF4-204ENST00000436336 ATP1A2P50993 1020 aa22.66■■□□□ 1.22
CPSF4-204ENST00000436336 KIAA1024LP59773 190 aa22.66■■□□□ 1.22
CPSF4-204ENST00000436336 RPL6Q02878 288 aaKnown RBP22.66■■□□□ 1.22
CPSF4-204ENST00000436336 CSHL1Q14406 222 aa22.66■■□□□ 1.22
CPSF4-204ENST00000436336 SEPT7Q16181 437 aaKnown RBP22.66■■□□□ 1.22
CPSF4-204ENST00000436336 FAM83EQ2M2I3 478 aa22.66■■□□□ 1.22
CPSF4-204ENST00000436336 OTOAQ7RTW8 1153 aa22.66■■□□□ 1.22
CPSF4-204ENST00000436336 ZBTB2Q8N680 514 aa22.66■■□□□ 1.22
CPSF4-204ENST00000436336 ANKRD42Q8N9B4 389 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms