RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ZMIZ2Q8NF64 920 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 PIWIL2Q8TC59 973 aaKnown RBP11.1□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF514Q96K75 400 aaPredicted RBP11.1□□□□□ -0.63
SCN4A-201ENST00000435607 HEPHQ9BQS7 1158 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 DNMT3AQ9Y6K1 912 aaPredicted RBP11.1□□□□□ -0.63
SCN4A-201ENST00000435607 ITSN1Q15811 1721 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 ADGRB3O60242 1522 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 COL6A1P12109 1028 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 MRPS5P82675 430 aaKnown RBP11.1□□□□□ -0.63
SCN4A-201ENST00000435607 SLC8B1Q6J4K2 584 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 RNF148Q8N7C7 305 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 ZCCHC10Q8TBK6 192 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 C2orf15Q8WU43 125 aaKnown RBP11.1□□□□□ -0.63
SCN4A-201ENST00000435607 STYXQ8WUJ0 223 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 NINJ1Q92982 152 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 LGR4Q9BXB1 951 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 OSER1Q9NX31 292 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 GHRLQ9UBU3 117 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 USP31Q70CQ4 1352 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 TECPR2O15040 1411 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 TACSTD2P09758 323 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 UROSP10746 265 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 GPM6BQ13491 265 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 IL18Q14116 193 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 DPYSQ14117 519 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 EXOSC8Q96B26 276 aaKnown RBP11.1□□□□□ -0.63
SCN4A-201ENST00000435607 CSTBP04080 98 aaKnown RBP11.1□□□□□ -0.63
SCN4A-201ENST00000435607 CHAF1BQ13112 559 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 RNF19BQ6ZMZ0 732 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 ECHDC2Q86YB7 292 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 PLD4Q96BZ4 506 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 LRTM1Q9HBL6 345 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 SLC2A4RGQ9NR83 387 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 BBIP1A8MTZ0 92 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 SLC30A4O14863 429 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 VEGFDO43915 354 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 TULP3O75386 442 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 RPP40O75818 363 aaKnown RBP11.1□□□□□ -0.63
SCN4A-201ENST00000435607 SLITRK3O94933 977 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 PECAM1P16284 738 aaPredicted RBP11.1□□□□□ -0.63
SCN4A-201ENST00000435607 IL7RP16871 459 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 CXCR1P25024 350 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 RGS21Q2M5E4 152 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 HFE2Q6ZVN8 426 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 USP49Q70CQ1 688 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 NPAS4Q8IUM7 802 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 TRPM4Q8TD43 1214 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 NXF3Q9H4D5 531 aaKnown RBP11.1□□□□□ -0.63
SCN4A-201ENST00000435607 GDAP2Q9NXN4 497 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 MUSKO15146 869 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 IRF2P14316 349 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 KIR3DL1P43629 444 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 DGKGP49619 791 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 KHKP50053 298 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 IST1P53990 364 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 TAF10Q12962 218 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 OCLNQ16625 522 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 PRSS58Q8IYP2 241 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 POU5F2Q8N7G0 328 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 KLHL32Q96NJ5 620 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 SALL1Q9NSC2 1324 aa11.1□□□□□ -0.63
SCN4A-201ENST00000435607 A0A1W2PQ45 241 aaPredicted RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 A0A1W2PQY0 241 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 PTX3P26022 381 aaPredicted RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 GNPDA1P46926 289 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 POC5Q8NA72 575 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 HMGB4Q8WW32 186 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 EPYCQ99645 322 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 ACO2Q99798 780 aaKnown RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 TCF7L1Q9HCS4 588 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 RAP2CQ9Y3L5 183 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 POLR3HQ9Y535 204 aaPredicted RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 CHD1O14646 1710 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 PAGE1O75459 146 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 PRAMEF12O95522 483 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 PGRP06401 933 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 PLP2Q04941 152 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 CXorf57Q6NSI4 855 aaKnown RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 CFAP52Q8N1V2 620 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 PCDH20Q8N6Y1 951 aaKnown RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 CD99L2Q8TCZ2 262 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 OTUB2Q96DC9 234 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 FCRL2Q96LA5 508 aaPredicted RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 MKKSQ9NPJ1 570 aaPredicted RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 ITGB1BP2Q9UKP3 347 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 RUVBL1Q9Y265 456 aaKnown RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 ELOA3DA6NLF2 546 aaPredicted RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 MAFO75444 373 aaPredicted RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 IPO13O94829 963 aaKnown RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 AGR2O95994 175 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 C9P02748 559 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 CPN2P22792 545 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 PSMA1P25786 263 aaKnown RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 SLC1A5Q15758 541 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 NRF1Q16656 503 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 ELOA3BQ3SY89 546 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 ADNP2Q6IQ32 1131 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 SYCE2Q6PIF2 218 aa11.09□□□□□ -0.63
SCN4A-201ENST00000435607 C2orf73Q8N5S3 287 aaPredicted RBP11.09□□□□□ -0.63
SCN4A-201ENST00000435607 ELOA3Q8NG57 546 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms