RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 Q6ZSR9 355 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 TAS2R42Q7RTR8 314 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 SPRED1Q7Z699 444 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 RALGPS2Q86X27 583 aaPredicted RBP11.68□□□□□ -0.54
CD44-209ENST00000433892 ERI1Q8IV48 349 aaKnown RBP11.68□□□□□ -0.54
CD44-209ENST00000433892 ABI1Q8IZP0 508 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 MAGEE2Q8TD90 523 aaPredicted RBP11.68□□□□□ -0.54
CD44-209ENST00000433892 RPF2Q9H7B2 306 aaKnown RBP11.68□□□□□ -0.54
CD44-209ENST00000433892 ANAPC2Q9UJX6 822 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 PHF24Q9UPV7 400 aa11.68□□□□□ -0.54
CD44-209ENST00000433892 STX7O15400 261 aaKnown RBP11.67□□□□□ -0.54
CD44-209ENST00000433892 CLOCKO15516 846 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 TSPAN3O60637 253 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 RHOCP08134 193 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 FCGR1AP12314 374 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 AAK1Q2M2I8 961 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 SPATS1Q496A3 300 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 PDCD4Q53EL6 469 aaKnown RBP11.67□□□□□ -0.54
CD44-209ENST00000433892 C16orf59Q7L2K0 433 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 TAS1R1Q7RTX1 841 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 EFL1Q7Z2Z2 1120 aaKnown RBP11.67□□□□□ -0.54
CD44-209ENST00000433892 CLVS1Q8IUQ0 354 aaPredicted RBP11.67□□□□□ -0.54
CD44-209ENST00000433892 PCSK9Q8NBP7 692 aaKnown RBP11.67□□□□□ -0.54
CD44-209ENST00000433892 GAB3Q8WWW8 586 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 SEPT8Q92599 483 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 BIRC7Q96CA5 298 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 GKN1Q9NS71 199 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 RIC8BQ9NVN3 520 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 EBF1Q9UH73 591 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 VPS9D1Q9Y2B5 631 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 FADS3Q9Y5Q0 445 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 CHD5Q8TDI0 1954 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 GBF1Q92538 1859 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.67□□□□□ -0.54
CD44-209ENST00000433892 FAM234BA2RU67 622 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 TYW5A2RUC4 315 aaKnown RBP11.67□□□□□ -0.54
CD44-209ENST00000433892 F11P03951 625 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 KLKB1P03952 638 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 ALDH2P05091 517 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 HRH2P25021 359 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 HTR6P50406 440 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 EEFSECP57772 596 aaKnown RBP11.67□□□□□ -0.54
CD44-209ENST00000433892 OR4D2P58180 307 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 PLIN5Q00G26 463 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 ZNF177Q13360 481 aaPredicted RBP11.67□□□□□ -0.54
CD44-209ENST00000433892 PLA2G4EQ3MJ16 856 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 PYCR3Q53H96 274 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 RGMBQ6NW40 437 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 PRSS55Q6UWB4 352 aaPredicted RBP11.67□□□□□ -0.54
CD44-209ENST00000433892 GPR141Q7Z602 305 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 TMEM173Q86WV6 379 aaPredicted RBP11.67□□□□□ -0.54
CD44-209ENST00000433892 SFRP1Q8N474 314 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 TNIP2Q8NFZ5 429 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 FAM81AQ8TBF8 368 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 METTL6Q8TCB7 284 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 VPS50Q96JG6 964 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 PPM1MQ96MI6 270 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 RNF145Q96MT1 663 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 PFDN4Q9NQP4 134 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 MARCH5Q9NX47 278 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 ZIM2Q9NZV7 527 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 FRMPD3Q5JV73 1810 aa11.67□□□□□ -0.54
CD44-209ENST00000433892 hCG_2014768A0A024R1R8 64 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 PFDN6O15212 129 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 KATNA1O75449 491 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 CLDN11O75508 207 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 SNAP29O95721 258 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 LDLRP01130 860 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 CAPN1P07384 714 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 RPS9P46781 194 aaKnown RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 SLC11A1P49279 550 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 MRPL19P49406 292 aaKnown RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 ACLYP53396 1101 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 ESRRGP62508 458 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 EMX2Q04743 252 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 TRAF2Q12933 501 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 PRKG2Q13237 762 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 AASDHQ4L235 1098 aaPredicted RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 CYBRD1Q53TN4 286 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 FUT10Q6P4F1 479 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 TBPL2Q6SJ96 375 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 IL27RAQ6UWB1 636 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 SAPCD2Q86UD0 394 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 ZFAND4Q86XD8 727 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 TBC1D21Q8IYX1 336 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 DHRSXQ8N5I4 330 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 KCNJ9Q92806 393 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 ZNF382Q96SR6 550 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 CHID1Q9BWS9 393 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 ADGRE3Q9BY15 652 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 LRRC3Q9BY71 257 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 MUC13Q9H3R2 512 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 PREBQ9HCU5 417 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 SMPD3Q9NY59 655 aaPredicted RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 ILVBLA1L0T0 632 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 ADAM12O43184 909 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 SNAP91O60641 907 aa11.66□□□□□ -0.54
CD44-209ENST00000433892 ENO2P09104 434 aaPredicted RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 CNPP09543 421 aaKnown RBP11.66□□□□□ -0.54
CD44-209ENST00000433892 IRF1P10914 325 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms