RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 A0A0A6YYK5 440 aaPredicted RBP9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 AURKAO14965 403 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 RAD1O60671 282 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 NDST3O95803 873 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 MT-CYBP00156 380 aaPredicted RBP9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 SLC4A1P02730 911 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 C9P02748 559 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 XRCC1P18887 633 aaPredicted RBP9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 PTPN3P26045 913 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 CDKN2BP42772 138 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 NR2C2P49116 596 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 DYNLT1P63172 113 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 CLCA4Q14CN2 919 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 PCSK7Q16549 785 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 KHDC1Q4VXA5 237 aaKnown RBP9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 TEX44Q53QW1 395 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 SNAP47Q5SQN1 464 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 CRTC3Q6UUV7 619 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 MFSD7Q6UXD7 560 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 B4GALNT4Q76KP1 1039 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 PRICKLE2Q7Z3G6 844 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 RFX6Q8HWS3 928 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 NCSTNQ92542 709 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 SLC45A3Q96JT2 553 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 TEKT5Q96M29 485 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 CCDC42Q96M95 316 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 PLEKHG4BQ96PX9 1271 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 VPS35Q96QK1 796 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 SRPK1Q96SB4 655 aaKnown RBP9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 ZPBPQ9BS86 351 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 TIMM29Q9BSF4 260 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 TBC1D10AQ9BXI6 508 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 GPR63Q9BZJ6 419 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 OSGEPL1Q9H4B0 414 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 GEMIN8Q9NWZ8 242 aaKnown RBP9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 DDX56Q9NY93 547 aaKnown RBP9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 OGFRQ9NZT2 677 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 SCHIP1Q9P0W5 487 aaPredicted RBP9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 SLC23A2Q9UGH3 650 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 TMPRSS11EQ9UL52 423 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 INTUQ9ULD6 942 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 TMEM184BQ9Y519 407 aaPredicted RBP9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 SPO11Q9Y5K1 396 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 RELNP78509 3460 aa9.27□□□□□ -0.93
CDC42-IT1-201ENST00000431803 PTPN13Q12923 2485 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 LOC285095A0A1B0GVY8 99 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 SLC35F4A4IF30 521 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 A8MU76 341 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 PYCARD-AS1I3L0S3 204 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 MEN1O00255 615 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 KMOO15229 486 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 PSTPIP1O43586 416 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 VEGFDO43915 354 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 MTX2O75431 263 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 PMPCBO75439 489 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 EPOP01588 193 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 TPM1P09493 284 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 BRAFP15056 766 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 PECAM1P16284 738 aaPredicted RBP9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 ZNF7P17097 686 aaPredicted RBP9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 PTMSP20962 102 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 COMTP21964 271 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 MAP4P27816 1152 aaKnown RBP9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 CD68P34810 354 aaPredicted RBP9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 HMGCLP35914 325 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 MAPK9P45984 424 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 PPM1FP49593 454 aaPredicted RBP9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 HADHBP55084 474 aaKnown RBP9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 GFERP55789 205 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 ADCY2Q08462 1091 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 WASHC5Q12768 1159 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 INSCQ1MX18 579 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 ATP13A5Q4VNC0 1218 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 AGAP9Q5VTM2 703 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 BORAQ6PGQ7 559 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 KDELC1Q6UW63 502 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 ABRAXAS1Q6UWZ7 409 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 CEACAM20Q6UY09 585 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 WASH2PQ6VEQ5 465 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 TMEM26Q6ZUK4 368 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 TIPARPQ7Z3E1 657 aaKnown RBP9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 C11orf96Q7Z7L8 435 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 LRRTM4Q86VH4 590 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 PLXDC1Q8IUK5 500 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 NLGN4XQ8N0W4 816 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 NLGN4YQ8NFZ3 816 aaPredicted RBP9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 DTX3LQ8TDB6 740 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 C9orf72Q96LT7 481 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 CTRCQ99895 268 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 SLC25A18Q9H1K4 315 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 ADNPQ9H2P0 1102 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 TRABDQ9H4I3 376 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 CLMPQ9H6B4 373 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 APMAPQ9HDC9 416 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 WASH6PQ9NQA3 447 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 POT1Q9NUX5 634 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 ZNF624Q9P2J8 865 aaPredicted RBP9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 SAE1Q9UBE0 346 aaPredicted RBP9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 HYOU1Q9Y4L1 999 aa9.26□□□□□ -0.93
CDC42-IT1-201ENST00000431803 LOC101059948A0A1B0GTJ6 334 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms