RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 ARHGEF9O43307 516 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 TULP3O75386 442 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 KCNA5P22460 613 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 DNAJB1P25685 340 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 SFSWAPQ12872 951 aaKnown RBP12.5□□□□□ -0.41
CPNE4-201ENST00000429747 RFX4Q33E94 735 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 UNC50Q53HI1 259 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 MSANTD2Q6P1R3 559 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 ZNF605Q86T29 641 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 MCFD2Q8NI22 146 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 UROC1Q96N76 676 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 CCM2LQ9NUG4 571 aaPredicted RBP12.5□□□□□ -0.41
CPNE4-201ENST00000429747 OGNP20774 298 aaKnown RBP12.5□□□□□ -0.41
CPNE4-201ENST00000429747 ACADVLP49748 655 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 AGTR2P50052 363 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 EEFSECP57772 596 aaKnown RBP12.5□□□□□ -0.41
CPNE4-201ENST00000429747 PKDCCQ504Y2 493 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 ARMC4Q5T2S8 1044 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 CYP4V2Q6ZWL3 525 aaPredicted RBP12.5□□□□□ -0.41
CPNE4-201ENST00000429747 SLC13A3Q8WWT9 602 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 ELMO1Q92556 727 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 FEM1CQ96JP0 617 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 TSEN34Q9BSV6 310 aaKnown RBP12.5□□□□□ -0.41
CPNE4-201ENST00000429747 TDRD1Q9BXT4 1180 aaKnown RBP12.5□□□□□ -0.41
CPNE4-201ENST00000429747 TMCC3Q9ULS5 477 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 AP3M1Q9Y2T2 418 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 TBKBP1A7MCY6 615 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 KERAO60938 352 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 ZNF12P17014 697 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 CDKN2DP55273 166 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 GTF2H2Q13888 395 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 STARD3Q14849 445 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 FAM110CQ1W6H9 321 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 PPP4R4Q6NUP7 873 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 GTF2H2CQ6P1K8 395 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 CYP20A1Q6UW02 462 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 C11orf96Q7Z7L8 435 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 ELMOD1Q8N336 334 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 PLEKHA8Q96JA3 519 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 MUS81Q96NY9 551 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 TSGA13Q96PP4 275 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 CGREF1Q99674 301 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 PAAF1Q9BRP4 392 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 NUSAP1Q9BXS6 441 aaKnown RBP12.5□□□□□ -0.41
CPNE4-201ENST00000429747 CIPCQ9C0C6 399 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 NUAK2Q9H093 628 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 ADAMTS10Q9H324 1103 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 MEAF6Q9HAF1 191 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 WDR6Q9NNW5 1121 aaKnown RBP12.5□□□□□ -0.41
CPNE4-201ENST00000429747 IKZF3Q9UKT9 509 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 SNX6Q9UNH7 406 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 MAFKO60675 156 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 CYP2A7P20853 494 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 PABPC1LQ4VXU2 614 aaKnown RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 KLHL35Q6PF15 583 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 TPGS1Q6ZTW0 290 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 DDX53Q86TM3 631 aaKnown RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 TRIM69Q86WT6 500 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 AMER2Q8N7J2 671 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 CAPSLQ8WWF8 208 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 TMEM169Q96HH4 297 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 ZFYVE19Q96K21 471 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 CDK5RAP1Q96SZ6 601 aaKnown RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 WDR12Q9GZL7 423 aaKnown RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 DNAJC15Q9Y5T4 150 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 CXCR6O00574 342 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 NBNO60934 754 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 PENKP01210 267 aaPredicted RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 OR56A5P0C7T3 313 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 HAPLN1P10915 354 aaPredicted RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 EFNA1P20827 205 aaPredicted RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 ELK4P28324 431 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 CRATP43155 626 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 RPS24P62847 133 aaKnown RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 ALFQ53S48 1182 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 CES4AQ5XG92 561 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 LIX1Q8N485 282 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 RAET1EQ8TD07 263 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 S100ZQ8WXG8 99 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 ABHD8Q96I13 439 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 NSMCE3Q96MG7 304 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 AARSD1Q9BTE6 412 aaKnown RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 PDP1Q9P0J1 537 aaPredicted RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 PTBP2Q9UKA9 531 aaKnown RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 A0A0J9YVX5 310 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 IQCF5A8MTL0 148 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 PDZK1P1A8MUH7 402 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 NME4O00746 187 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 TBL1XO60907 577 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 PRKD3O94806 890 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 RPLP2P05387 115 aaKnown RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 ALOX15P16050 662 aaPredicted RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 PRKACGP22612 351 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 SCAPQ12770 1279 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 ELAVL2Q12926 359 aaKnown RBP12.49□□□□□ -0.41
CPNE4-201ENST00000429747 TUBB3Q13509 450 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 ZNF792Q3KQV3 632 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 TRAF7Q6Q0C0 670 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 AHSA2Q719I0 299 aa12.49□□□□□ -0.41
CPNE4-201ENST00000429747 RBFAQ8N0V3 343 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms