RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 CCDC159P0C7I6 412 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 ETFAP13804 333 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 ERCC2P18074 760 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 TYMPP19971 482 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 ANXA7P20073 488 aaKnown RBP5.5□□□□□ -1.53
LINC00348-201ENST00000428761 MC5RP33032 325 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 CCR10P46092 362 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 YPEL5P62699 121 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 ARF5P84085 180 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 COX10Q12887 443 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 TMED1Q13445 227 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 PGM5Q15124 567 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 PLEKHO1Q53GL0 409 aaPredicted RBP5.5□□□□□ -1.53
LINC00348-201ENST00000428761 OLFM4Q6UX06 510 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 LINC00696Q6ZRV3 163 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 MSANTD1Q6ZTZ1 278 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 CYB5R4Q7L1T6 521 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 CAMKMTQ7Z624 323 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 RABEPKQ7Z6M1 372 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 TMEM110Q86TL2 294 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 ADCK1Q86TW2 530 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 SERPINA11Q86U17 422 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 HAPLN4Q86UW8 402 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 CCDC25Q86WR0 208 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 SCYL3Q8IZE3 742 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 DENND6BQ8NEG7 585 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 OR14L1PQ8NHC6 308 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 HUS1BQ8NHY5 278 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 BCAS4Q8TDM0 211 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 SHC3Q92529 594 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 IGSF8Q969P0 613 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 RNF183Q96D59 192 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 HDAC11Q96DB2 347 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 CDCA5Q96FF9 252 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 LINC00615Q96LM1 132 aaPredicted RBP5.5□□□□□ -1.53
LINC00348-201ENST00000428761 PRAM1Q96QH2 718 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 CRACR2AQ9BSW2 395 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 MLPHQ9BV36 600 aaPredicted RBP5.5□□□□□ -1.53
LINC00348-201ENST00000428761 NT5C3AQ9H0P0 336 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 MMP27Q9H306 513 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 DNAJC18Q9H819 358 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 SEMA4GQ9NTN9 838 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 CWC15Q9P013 229 aaKnown RBP5.5□□□□□ -1.53
LINC00348-201ENST00000428761 COPG2Q9UBF2 871 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 NDRG3Q9UGV2 375 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 CPSF3Q9UKF6 684 aaKnown RBP5.5□□□□□ -1.53
LINC00348-201ENST00000428761 HPCAL4Q9UM19 191 aa5.5□□□□□ -1.53
LINC00348-201ENST00000428761 PIN4Q9Y237 131 aaKnown RBP5.5□□□□□ -1.53
LINC00348-201ENST00000428761 SLIT1O75093 1534 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 TYW5A2RUC4 315 aaKnown RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 WIPF3A6NGB9 483 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 OR6C76A6NM76 312 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 CCDC188H7C350 402 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 DNM1LO00429 736 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 PRPF4O43172 522 aaKnown RBP eCLIP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 SPRY1O43609 319 aaPredicted RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 DIAPH2O60879 1101 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 SMPD2O60906 423 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 GPC4O75487 556 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 BCAS2O75934 225 aaPredicted RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 SIX3O95343 332 aaPredicted RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 IGLV2-14P01704 120 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 CASP3P42574 277 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 PSMC4P43686 418 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 RAB28P51157 221 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 LUMP51884 338 aaPredicted RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 MRPS34P82930 218 aaKnown RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 ECT2LQ008S8 904 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 TUBB2AQ13885 445 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 LETM2Q2VYF4 491 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 FAM153CQ494X1 144 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 FBXO46Q6PJ61 603 aaPredicted RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 LRIG3Q6UXM1 1119 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 LINGO2Q7L985 606 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 ARID3BQ8IVW6 561 aaPredicted RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 SLC35F3Q8IY50 421 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 CCDC13Q8IYE1 715 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 SIX6OS1Q8N1H7 587 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 RTL3Q8N8U3 475 aaKnown RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 OR10S1Q8NGN2 331 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 MOAP1Q96BY2 351 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 RRNAD1Q96FB5 475 aaKnown RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 ZC3HAV1LQ96H79 300 aaKnown RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 CLMNQ96JQ2 1002 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 NTPCRQ9BSD7 190 aaKnown RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 TUBB2BQ9BVA1 445 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 NUP85Q9BW27 656 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 FAM129AQ9BZQ8 928 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 CDT1Q9H211 546 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 ABCG8Q9H221 673 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 PAPOLBQ9NRJ5 636 aaKnown RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 IL17RBQ9NRM6 502 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 OLAHQ9NV23 265 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 CHCHD3Q9NX63 227 aaKnown RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 MTMR10Q9NXD2 777 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 HAO2Q9NYQ3 351 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 CGNQ9P2M7 1197 aaKnown RBP5.49□□□□□ -1.53
LINC00348-201ENST00000428761 EXTL2Q9UBQ6 330 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 DNAJB4Q9UDY4 337 aa5.49□□□□□ -1.53
LINC00348-201ENST00000428761 IPO11Q9UI26 975 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms