RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 KCNK5O95279 499 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 ZNF7P17097 686 aaPredicted RBP14.35□□□□□ -0.11
SGCE-204ENST00000428696 VCLP18206 1134 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 PGAM1P18669 254 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 CSRP1P21291 193 aaKnown RBP14.35□□□□□ -0.11
SGCE-204ENST00000428696 FOXN2P32314 431 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 RPIAP49247 311 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 CTSCP53634 463 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 ACVR1Q04771 509 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 HLTFQ14527 1009 aaKnown RBP eCLIP14.35□□□□□ -0.11
SGCE-204ENST00000428696 LONRF1Q17RB8 773 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 AARS2Q5JTZ9 985 aaKnown RBP14.35□□□□□ -0.11
SGCE-204ENST00000428696 MRNIPQ6NTE8 343 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 NEPROQ6NW34 567 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 ZCCHC8Q6NZY4 707 aaKnown RBP14.35□□□□□ -0.11
SGCE-204ENST00000428696 CERS6Q6ZMG9 384 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 CAPN12Q6ZSI9 719 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 AMZ2Q86W34 360 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 NRROSQ86YC3 692 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
SGCE-204ENST00000428696 ZDHHC1Q8WTX9 485 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 PEX13Q92968 403 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 CCDC97Q96F63 343 aaPredicted RBP14.35□□□□□ -0.11
SGCE-204ENST00000428696 APOLD1Q96LR9 279 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 GRHL1Q9NZI5 618 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 CEP250Q9BV73 2442 aa14.35□□□□□ -0.11
SGCE-204ENST00000428696 GPR89AB7ZAQ6 455 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 PFDN6O15212 129 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 TNFSF14O43557 240 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 GPR89BP0CG08 455 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 GIMD1P0DJR0 217 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 CEACAM1P13688 526 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 ITGB6P18564 788 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 PSMA3P25788 255 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 RPL10P27635 214 aaKnown RBP14.34□□□□□ -0.11
SGCE-204ENST00000428696 MAGEA3P43357 314 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 B4GALNT1Q00973 533 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 CAV1Q03135 178 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 LRP8Q14114 963 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 SEMA3AQ14563 771 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 BRD3Q15059 726 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 NR0B2Q15466 257 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 GLE1Q53GS7 698 aaKnown RBP14.34□□□□□ -0.11
SGCE-204ENST00000428696 PPM1JQ5JR12 505 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 LVRNQ6Q4G3 990 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 ZNF547Q8IVP9 402 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 SFTPA2Q8IWL1 248 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 PALM2Q8IXS6 379 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 CFAP206Q8IYR0 622 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 ZBED8Q8IZ13 594 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 UNC5BQ8IZJ1 945 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 SDR16C5Q8N3Y7 309 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 PYROXD1Q8WU10 500 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 ZNF514Q96K75 400 aaPredicted RBP14.34□□□□□ -0.11
SGCE-204ENST00000428696 NAT9Q9BTE0 207 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 PRDM8Q9NQV8 689 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 EVA1BQ9NVM1 165 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 DLL3Q9NYJ7 618 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 ST14Q9Y5Y6 855 aa14.34□□□□□ -0.11
SGCE-204ENST00000428696 ASCC3Q8N3C0 2202 aaKnown RBP14.34□□□□□ -0.11
SGCE-204ENST00000428696 AGAP14A8MT82 685 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 CHUKO15111 745 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 CBFA2T3O75081 653 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 USP1O94782 785 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 ERVK-10P10266 1014 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 CKMT2P17540 419 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 NSG1P42857 185 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 TTPAP49638 278 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 DRG2P55039 364 aaKnown RBP14.33□□□□□ -0.11
SGCE-204ENST00000428696 CRYMQ14894 314 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 FASTKD3Q14CZ7 662 aaKnown RBP14.33□□□□□ -0.11
SGCE-204ENST00000428696 HSP90AA5PQ58FG0 334 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 SPANXN3Q5MJ09 141 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 C6orf132Q5T0Z8 1188 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 PTRHD1Q6GMV3 140 aaKnown RBP14.33□□□□□ -0.11
SGCE-204ENST00000428696 KIAA0930Q6ICG6 404 aaPredicted RBP14.33□□□□□ -0.11
SGCE-204ENST00000428696 DGLUCYQ7Z3D6 616 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 TMEM135Q86UB9 458 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 FBXO36Q8NEA4 188 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 FBXO25Q8TCJ0 367 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 PATE1Q8WXA2 126 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 ART4Q93070 314 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 SYNDIG1Q9H7V2 258 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 IARS2Q9NSE4 1012 aaKnown RBP14.33□□□□□ -0.11
SGCE-204ENST00000428696 TBC1D29Q9UFV1 150 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 DMGDHQ9UI17 866 aaKnown RBP14.33□□□□□ -0.11
SGCE-204ENST00000428696 PADI4Q9UM07 663 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 PSMD13Q9UNM6 376 aa14.33□□□□□ -0.11
SGCE-204ENST00000428696 BPTFQ12830 3046 aa14.33□□□□□ -0.12
SGCE-204ENST00000428696 TRBV5-4A0A0C4DH59 114 aa14.32□□□□□ -0.12
SGCE-204ENST00000428696 TP73O15350 636 aa14.32□□□□□ -0.12
SGCE-204ENST00000428696 TRIM16O95361 564 aa14.32□□□□□ -0.12
SGCE-204ENST00000428696 TTC4O95801 387 aa14.32□□□□□ -0.12
SGCE-204ENST00000428696 F7P08709 466 aaPredicted RBP14.32□□□□□ -0.12
SGCE-204ENST00000428696 IDSP22304 550 aa14.32□□□□□ -0.12
SGCE-204ENST00000428696 ARNTP27540 789 aa14.32□□□□□ -0.12
SGCE-204ENST00000428696 FMO4P31512 558 aa14.32□□□□□ -0.12
SGCE-204ENST00000428696 ARCN1P48444 511 aaKnown RBP14.32□□□□□ -0.12
SGCE-204ENST00000428696 DUSP3P51452 185 aaPredicted RBP14.32□□□□□ -0.12
SGCE-204ENST00000428696 CSE1LP55060 971 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms