RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 TRIQKQ629K1 86 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 OSTM1Q86WC4 334 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 C3orf14Q9HBI5 128 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 PNO1Q9NRX1 252 aaKnown RBP9.64□□□□□ -0.87
SNX13-203ENST00000428135 PIGVQ9NUD9 493 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 FBXL12Q9NXK8 326 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 SLC45A1Q9Y2W3 748 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 SH3GLB1Q9Y371 365 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 AK5Q9Y6K8 562 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 COL16A1Q07092 1604 aaPredicted RBP9.64□□□□□ -0.87
SNX13-203ENST00000428135 CCNDBP1O95273 360 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 GRIA1P42261 906 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 SEPHS1P49903 392 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 JAM2P57087 298 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 YBEYP58557 167 aaPredicted RBP9.64□□□□□ -0.87
SNX13-203ENST00000428135 SRP54P61011 504 aaKnown RBP9.64□□□□□ -0.87
SNX13-203ENST00000428135 KLF1Q13351 362 aaPredicted RBP9.64□□□□□ -0.87
SNX13-203ENST00000428135 RAB30Q15771 203 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 LSM12Q3MHD2 195 aaKnown RBP9.64□□□□□ -0.87
SNX13-203ENST00000428135 LDLRAD1Q5T700 205 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 TXNRD3NBQ6F5E7 133 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 LNX2Q8N448 690 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 UBASH3BQ8TF42 649 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 DTLQ9NZJ0 730 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 ADGRE2Q9UHX3 823 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 SPATA2Q9UM82 520 aa9.64□□□□□ -0.87
SNX13-203ENST00000428135 TRIM24O15164 1050 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 ENTPD5O75356 428 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 KRT36O76013 467 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 SAGP10523 405 aaPredicted RBP9.63□□□□□ -0.87
SNX13-203ENST00000428135 DRG2P55039 364 aaKnown RBP9.63□□□□□ -0.87
SNX13-203ENST00000428135 SLC10A7Q0GE19 358 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 CARD16Q5EG05 197 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 IL23RQ5VWK5 629 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 FAM220AQ7Z4H9 259 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 RASGRP3Q8IV61 690 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 UNC5BQ8IZJ1 945 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 OR5M3Q8NGP4 307 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 SLC22A17Q8WUG5 538 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 CLPTM1LQ96KA5 538 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 ART5Q96L15 291 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 NR2E1Q9Y466 385 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 BTNL10A8MVZ5 291 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 ERN1O75460 977 aaKnown RBP9.63□□□□□ -0.87
SNX13-203ENST00000428135 GNSP15586 552 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 PTPN5P54829 565 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 PCDH1Q08174 1060 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 SLC1A5Q15758 541 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 TRIM40Q6P9F5 258 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 DDHD1Q8NEL9 900 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 PXYLP1Q8TE99 480 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 CRISPLD1Q9H336 500 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 NEUROD4Q9HD90 331 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 RPS6KA6Q9UK32 745 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 A0A0U1RQF3 1178 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 IPO13O94829 963 aaKnown RBP9.63□□□□□ -0.87
SNX13-203ENST00000428135 HLA-DQB2P05538 268 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 UGT2B15P54855 530 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 IRF9Q00978 393 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 ZBTB6Q15916 424 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 FBXL22Q6P050 247 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 KBTBD2Q8IY47 623 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 MOSPD2Q8NHP6 518 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 ZMAT2Q96NC0 199 aaKnown RBP9.63□□□□□ -0.87
SNX13-203ENST00000428135 SGIP1Q9BQI5 828 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 BCO2Q9BYV7 579 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 MARCH7Q9H992 704 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 PTGFRNQ9P2B2 879 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 PCDHB1Q9Y5F3 818 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 KIAA0100Q14667 2235 aaKnown RBP9.63□□□□□ -0.87
SNX13-203ENST00000428135 C15orf38-AP3S2A0A0A6YYH1 394 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 EFCAB10A6NFE3 127 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 CLDN9O95484 217 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 ACAP2Q15057 778 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 MTX3Q5HYI7 312 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 ARMC4Q5T2S8 1044 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 TSTD2Q5T7W7 516 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 ARPINQ7Z6K5 226 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 SPPL2CQ8IUH8 684 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 MCEMP1Q8IX19 187 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 UBR7Q8N806 425 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 SEC14L3Q9UDX4 400 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 ERVK-11Q9UQG0 969 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 TPRKBQ9Y3C4 175 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 SNX3O60493 162 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 NIPSNAP2O75323 286 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 TYRP14679 529 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 JAK1P23458 1154 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 RHAGQ02094 409 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 PDK4Q16654 411 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 TRMT10BQ6PF06 316 aaKnown RBP9.63□□□□□ -0.87
SNX13-203ENST00000428135 GDPD4Q6W3E5 623 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 SLC39A5Q6ZMH5 540 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 DHDDSQ86SQ9 333 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 C8orf59Q8N0T1 100 aaPredicted RBP9.63□□□□□ -0.87
SNX13-203ENST00000428135 LIX1Q8N485 282 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 COQ7Q99807 217 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 GALNT8Q9NY28 637 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 GGA2Q9UJY4 613 aa9.63□□□□□ -0.87
SNX13-203ENST00000428135 CPSF4LA6NMK7 179 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms