RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 hCG_1809904A0A1W2PP81 198 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 A0A1W2PPE2 198 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 A0A1W2PR64 198 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 LNP1A1A4G5 178 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 H0YIN7 160 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 TMEM178BH3BS89 294 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 SH2B2O14492 632 aaPredicted RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 PAPSS1O43252 624 aaPredicted RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 ZNHIT1O43257 154 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 ADAM20O43506 726 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 ZNF217O75362 1048 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 DDNO94850 711 aaPredicted RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 BCL10O95999 233 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 DNTTP04053 509 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 ABCB1P08183 1280 aaPredicted RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 KRT19P08727 400 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 NR2F1P10589 423 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 PRLRP16471 622 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 TRIM21P19474 475 aaKnown RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 UGT1A1P22309 533 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 KCNA5P22460 613 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 IL15P40933 162 aaPredicted RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 CAPZA2P47755 286 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 MMP14P50281 582 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 HSD17B4P51659 736 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 ISL1P61371 349 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 SNRPEP62304 92 aaKnown RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 RPL36AP83881 106 aaKnown RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 EEF1A2Q05639 463 aaKnown RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 SLC20A2Q08357 652 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 SPOCK1Q08629 439 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 KIF5AQ12840 1032 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 COASYQ13057 564 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 PLA2G7Q13093 441 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 MVPQ14764 893 aaKnown RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 PCLAFQ15004 111 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 RASA2Q15283 850 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 SYT16Q17RD7 645 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 SETMARQ53H47 684 aaPredicted RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 FAM76BQ5HYJ3 339 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 RAD9BQ6WBX8 426 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 TPRG1Q6ZUI0 275 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 INTS8Q75QN2 995 aaKnown RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 PRPF39Q86UA1 669 aaKnown RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 GALNT13Q8IUC8 556 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 MCEMP1Q8IX19 187 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 C1orf87Q8N0U7 546 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 NME8Q8N427 588 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 FBXO39Q8N4B4 442 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 MINDY1Q8N5J2 469 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 SLC5A8Q8N695 610 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 POMGNT2Q8NAT1 580 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 KCTD6Q8NC69 237 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 OR5R1Q8NH85 324 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 BBS10Q8TAM1 723 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 TBC1D16Q8TBP0 767 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 SECTM1Q8WVN6 248 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 LRRC59Q96AG4 307 aaKnown RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 PTERQ96BW5 349 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 OXNAD1Q96HP4 312 aaPredicted RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 IGSF21Q96ID5 467 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 GCNAQ96QF7 691 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 SPRY4Q9C004 299 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 SEMA6AQ9H2E6 1030 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 WSB2Q9NYS7 404 aaPredicted RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 MDFICQ9P1T7 246 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 DNAJB4Q9UDY4 337 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 AMACRQ9UHK6 382 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 HACL1Q9UJ83 578 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 POU2F3Q9UKI9 436 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 OR2W1Q9Y3N9 320 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 PDS5AQ29RF7 1337 aaKnown RBP2.38□□□□□ -2.03
PTPRC-208ENST00000427110 KIF26BQ2KJY2 2108 aa2.38□□□□□ -2.03
PTPRC-208ENST00000427110 ARHGEF40Q8TER5 1519 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 TMEM8BA6NDV4 472 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 SRRM3A6NNA2 597 aaPredicted RBP2.37□□□□□ -2.03
PTPRC-208ENST00000427110 SMTNL1A8MU46 457 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 PLK4O00444 970 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 NDUFS4O43181 175 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 GRID2O43424 1007 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 ZNF432O94892 652 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 CAMTA2O94983 1202 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 BMP10O95393 424 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 TPOP07202 933 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 CDH1P12830 882 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 ITGA2P17301 1181 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 DNASE1P24855 282 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 HRH2P25021 359 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 CTSCP53634 463 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 GAS1P54826 345 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 ERVFC1-1P60608 527 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 UBXN2AP68543 259 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 RELQ04864 619 aaPredicted RBP2.37□□□□□ -2.03
PTPRC-208ENST00000427110 CXCL9Q07325 125 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 GRAPQ13588 217 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 GTF2H2Q13888 395 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 ZNF234Q14588 700 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 KIF19Q2TAC6 998 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 ZNF628Q5EBL2 1059 aa2.37□□□□□ -2.03
PTPRC-208ENST00000427110 GARNL3Q5VVW2 1013 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms