RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 RCN3Q96D15 328 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 ZNF607Q96SK3 696 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 CCDC28BQ9BUN5 200 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 NKX2-4Q9H2Z4 354 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 RIBC2Q9H4K1 309 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 CARS2Q9HA77 564 aaKnown RBP13.73□□□□□ -0.21
RPL28-202ENST00000426763 DLGAP2Q9P1A6 1054 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 MRTO4Q9UKD2 239 aaKnown RBP13.73□□□□□ -0.21
RPL28-202ENST00000426763 SLC9A8Q9Y2E8 581 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 POLR1DQ9Y2S0 133 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 AP4S1Q9Y587 144 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 TTC24A2A3L6 582 aaPredicted RBP13.73□□□□□ -0.21
RPL28-202ENST00000426763 PLIN3O60664 434 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 GJB5O95377 273 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 RPL26P61254 145 aaKnown RBP13.73□□□□□ -0.21
RPL28-202ENST00000426763 B3GNT9Q6UX72 402 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 GPR141Q7Z602 305 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 RPL26L1Q9UNX3 145 aaKnown RBP13.73□□□□□ -0.21
RPL28-202ENST00000426763 SCAMP1O15126 338 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 FFAR2O15552 330 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 FAM20BO75063 409 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 ITGAXP20702 1163 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 MRPS22P82650 360 aaKnown RBP13.73□□□□□ -0.21
RPL28-202ENST00000426763 TIGD2Q4W5G0 525 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 TRMT10BQ6PF06 316 aaKnown RBP13.73□□□□□ -0.21
RPL28-202ENST00000426763 TPRG1Q6ZUI0 275 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 ZNF572Q7Z3I7 529 aaPredicted RBP13.73□□□□□ -0.21
RPL28-202ENST00000426763 C7orf26Q96N11 449 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 EXD2Q9NVH0 621 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 STRCQ7RTU9 1775 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 ANKRD66B4E2M5 251 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 C9orf64Q5T6V5 341 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 IRGCQ6NXR0 463 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 ALYREFQ86V81 257 aaKnown RBP13.73□□□□□ -0.21
RPL28-202ENST00000426763 MFHAS1Q9Y4C4 1052 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 TIMM22Q9Y584 194 aa13.73□□□□□ -0.21
RPL28-202ENST00000426763 GTPBP1O00178 669 aaKnown RBP13.72□□□□□ -0.21
RPL28-202ENST00000426763 OR1F1O43749 312 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 KRT8P05787 483 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 DLDP09622 509 aaKnown RBP13.72□□□□□ -0.21
RPL28-202ENST00000426763 GRIA3P42263 894 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 DHPSP49366 369 aaPredicted RBP13.72□□□□□ -0.21
RPL28-202ENST00000426763 NUP107P57740 925 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 USP39Q53GS9 565 aaKnown RBP13.72□□□□□ -0.21
RPL28-202ENST00000426763 DHDDSQ86SQ9 333 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 KXD1Q9BQD3 176 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 MCMBPQ9BTE3 642 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 EPS8L2Q9H6S3 715 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 SPHK2Q9NRA0 654 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 TIAM2Q8IVF5 1701 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 CLOCKO15516 846 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 UGT1A9O60656 530 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 CYP11A1P05108 521 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 PCSK2P16519 638 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 UGT1A6P19224 532 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 UGT1A1P22309 533 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 UGT1A4P22310 534 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 JAK1P23458 1154 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 NDUFS1P28331 727 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 UGT1A3P35503 534 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 UGT1A5P35504 534 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 UGT1A7Q9HAW7 530 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 UGT1A10Q9HAW8 530 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 UGT1A8Q9HAW9 530 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 PGAP2Q9UHJ9 254 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 PCDHGB3Q9Y5G1 929 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 A0A0J9YYE9 177 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 H3BNH8 94 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 ADH1BP00325 375 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 STXBP1P61764 594 aaKnown RBP13.72□□□□□ -0.21
RPL28-202ENST00000426763 RAB33AQ14088 237 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 METTL21AQ8WXB1 218 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 TFB2MQ9H5Q4 396 aaKnown RBP13.72□□□□□ -0.21
RPL28-202ENST00000426763 CNTN6Q9UQ52 1028 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 ZNF840PA6NDX5 716 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 CLDN4O14493 209 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 CTSAP10619 480 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 ALAS2P22557 587 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 KIR3DL1P43629 444 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 ARL13AQ5H913 290 aaPredicted RBP13.72□□□□□ -0.21
RPL28-202ENST00000426763 PLEKHM3Q6ZWE6 761 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 VN1R5Q7Z5H4 357 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 NET1Q7Z628 596 aaPredicted RBP13.72□□□□□ -0.21
RPL28-202ENST00000426763 RNF168Q8IYW5 571 aaPredicted RBP13.72□□□□□ -0.21
RPL28-202ENST00000426763 POMGNT2Q8NAT1 580 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 CEP295NLQ96MC4 621 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 PEBP4Q96S96 227 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 WDR55Q9H6Y2 383 aaPredicted RBP13.72□□□□□ -0.21
RPL28-202ENST00000426763 EXO5Q9H790 373 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 TMEM59LQ9UK28 342 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 BEST1O76090 585 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 CFIP05156 583 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 ACP5P13686 325 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 SLC6A2P23975 617 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 ZNF460Q14592 562 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 TCEAL1Q15170 157 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 CHRNA6Q15825 494 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 UNC5BQ8IZJ1 945 aa13.72□□□□□ -0.21
RPL28-202ENST00000426763 FSTL5Q8N475 847 aaPredicted RBP13.72□□□□□ -0.21
RPL28-202ENST00000426763 C12orf76Q8N812 135 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms