RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 IQCDQ96DY2 449 aa6.23□□□□□ -1.41
NIF3L1-207ENST00000426253 SERAC1Q96JX3 654 aa6.23□□□□□ -1.41
NIF3L1-207ENST00000426253 NCAPGQ9BPX3 1015 aa6.23□□□□□ -1.41
NIF3L1-207ENST00000426253 XPO4Q9C0E2 1151 aaKnown RBP6.23□□□□□ -1.41
NIF3L1-207ENST00000426253 DHX35Q9H5Z1 703 aaKnown RBP6.23□□□□□ -1.41
NIF3L1-207ENST00000426253 GPATCH2LQ9NWQ4 482 aa6.23□□□□□ -1.41
NIF3L1-207ENST00000426253 DONSONQ9NYP3 566 aa6.23□□□□□ -1.41
NIF3L1-207ENST00000426253 DTLQ9NZJ0 730 aa6.23□□□□□ -1.41
NIF3L1-207ENST00000426253 ARHGAP20Q9P2F6 1191 aa6.23□□□□□ -1.41
NIF3L1-207ENST00000426253 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.23□□□□□ -1.41
NIF3L1-207ENST00000426253 ACTL7AQ9Y615 435 aa6.23□□□□□ -1.41
NIF3L1-207ENST00000426253 F8P00451 2351 aa6.23□□□□□ -1.41
NIF3L1-207ENST00000426253 DNHD1Q96M86 4753 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 CKAP5Q14008 2032 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 A0A1W2PR77 199 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 ZSCAN5CA6NGD5 496 aaPredicted RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 EIF3CLB5ME19 914 aaKnown RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 C10orf142B7Z368 130 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 RASA4BC9J798 803 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 PRAMEF26H0Y7S4 382 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 RNF103O00237 685 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 EEF2KO00418 725 aaKnown RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 SLC31A1O15431 190 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 RASA4O43374 803 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 LATO43561 262 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 PRPSAP2O60256 369 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 KDM1AO60341 852 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 MAGEC1O60732 1142 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 PAK4O96013 591 aaPredicted RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 WNT1P04628 370 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 MYBL1P10243 752 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 CDK4P11802 303 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 MIPP30301 263 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 GKP32189 559 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 HTR7P34969 479 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 NUDT1P36639 197 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 CCNHP51946 323 aaPredicted RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 SCAND1P57086 179 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 TAS2R38P59533 333 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 TPI1P60174 286 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 SNRPD1P62314 119 aaKnown RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 PPP2CBP62714 309 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 PPP2CAP67775 309 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 RAD51Q06609 339 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 DBPQ10586 325 aaPredicted RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 CA9Q16790 459 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 SETMARQ53H47 684 aaPredicted RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 BOLA3Q53S33 107 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 INO80DQ53TQ3 878 aaPredicted RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 CCDC122Q5T0U0 273 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 PIP5KL1Q5T9C9 394 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 AGBL4Q5VU57 503 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 LAYNQ6UX15 382 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 PHYKPLQ8IUZ5 450 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 UMODL1-AS1Q8N2C9 162 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 RTL3Q8N8U3 475 aaKnown RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 OR2AP1Q8NGE2 309 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 FNIP1Q8TF40 1166 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 CASKIN2Q8WXE0 1202 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 KLK6Q92876 244 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 FOXRED1Q96CU9 486 aaPredicted RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 PPP1R16AQ96I34 528 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 FEM1CQ96JP0 617 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 EIF3CQ99613 913 aaKnown RBP6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 TM6SF2Q9BZW4 377 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 TRIM7Q9C029 511 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 SLC39A8Q9C0K1 460 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 KLC2Q9H0B6 622 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 TSPY26PQ9H489 355 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 ZDHHC6Q9H6R6 413 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 PREBQ9HCU5 417 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 DMTF1Q9Y222 760 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 PCDHGA1Q9Y5H4 931 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 MRFAP1Q9Y605 127 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 SCINQ9Y6U3 715 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 CSMD1Q96PZ7 3565 aa6.22□□□□□ -1.41
NIF3L1-207ENST00000426253 A0A087X0T9 212 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 A0A1B0GTQ1 180 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 C16orf96A6NNT2 1141 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 J3KR12 359 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 PCDHGA12O60330 932 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 LRCH4O75427 683 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 SNUPNO95149 360 aaKnown RBP6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 GSRP00390 522 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 GYPCP04921 128 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 FAM228BP0C875 321 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 ADRB3P13945 408 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 ERCC2P18074 760 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 AOAHP28039 575 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 HCAR3P49019 387 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 PAPOLAP51003 745 aaKnown RBP6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 NEK3P51956 506 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 NDST2P52849 883 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 INHBCP55103 352 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 RPS21P63220 83 aaKnown RBP6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 IL9RQ01113 521 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 DNAJC3Q13217 504 aa6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 PIGHQ14442 188 aaPredicted RBP6.21□□□□□ -1.42
NIF3L1-207ENST00000426253 PCBP2Q15366 365 aaKnown RBP eCLIP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms