RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 SCML4Q8N228 414 aa4.72□□□□□ -1.65
RAB3GAP1-202ENST00000425393 ZNF441Q8N8Z8 693 aa4.72□□□□□ -1.65
RAB3GAP1-202ENST00000425393 SLC20A1Q8WUM9 679 aa4.72□□□□□ -1.65
RAB3GAP1-202ENST00000425393 FIG4Q92562 907 aa4.72□□□□□ -1.65
RAB3GAP1-202ENST00000425393 PIGTQ969N2 578 aa4.72□□□□□ -1.65
RAB3GAP1-202ENST00000425393 SAT2Q96F10 170 aaPredicted RBP4.72□□□□□ -1.65
RAB3GAP1-202ENST00000425393 MXD3Q9BW11 206 aa4.72□□□□□ -1.65
RAB3GAP1-202ENST00000425393 PDE7BQ9NP56 450 aa4.72□□□□□ -1.65
RAB3GAP1-202ENST00000425393 WBP11Q9Y2W2 641 aaKnown RBP4.72□□□□□ -1.65
RAB3GAP1-202ENST00000425393 GLOD5A6NK44 160 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 TULP2O00295 520 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 CTDSP2O14595 271 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ADAMDEC1O15204 470 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ZNF217O75362 1048 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ERAL1O75616 437 aaKnown RBP4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 WISP2O76076 250 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 BEST1O76090 585 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 CSPG5O95196 566 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ADRB2P07550 413 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 MYOD1P15172 320 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 KCNA5P22460 613 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 USP8P40818 1118 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 EIF2DP41214 584 aaKnown RBP4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 TMPOP42166 694 aaKnown RBP4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 NRIP1P48552 1158 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 HSD17B4P51659 736 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 SNX16P57768 344 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 PDE1BQ01064 536 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 RELQ04864 619 aaPredicted RBP4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ZBTB17Q13105 803 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 KCNC3Q14003 757 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ZNF234Q14588 700 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 KRTAP5-4Q6L8H1 288 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ZNF449Q6P9G9 518 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ZNF534Q76KX8 674 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 AACSQ86V21 672 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 LINC00346Q8IVM7 164 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ODF3L1Q8IXM7 274 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 POC1AQ8NBT0 407 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 SLC44A1Q8WWI5 657 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 MOAP1Q96BY2 351 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 NUDCD1Q96RS6 583 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 SERINC2Q96SA4 455 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 PPIL3Q9H2H8 161 aaKnown RBP4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 GIMAP4Q9NUV9 329 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 TSPYL4Q9UJ04 414 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 DBNLQ9UJU6 430 aaKnown RBP4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 PLAGL1Q9UM63 463 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 DLGAP4Q9Y2H0 992 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 KLHL20Q9Y2M5 609 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ZNF541Q9H0D2 1346 aa4.71□□□□□ -1.66
RAB3GAP1-202ENST00000425393 CTAGE9A4FU28 777 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 LRRC72A6NJI9 287 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 PRAC2D3DTV9 90 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 GH2P01242 217 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 CTAGE8P0CG41 777 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ITGA2P17301 1181 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 AMD1P17707 334 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 IL11P20809 199 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 KRTAP10-12P60413 245 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 IFI35P80217 286 aaPredicted RBP4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ARL16Q0P5N6 197 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 BAATQ14032 418 aaPredicted RBP4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 BECN1Q14457 450 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 DLG2Q15700 870 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 NTRK2Q16620 822 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 STPG1Q5TH74 334 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ZNF704Q6ZNC4 412 aaPredicted RBP4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ASB18Q6ZVZ8 466 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 GALNT5Q7Z7M9 940 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 CCDC190Q86UF4 302 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 GPR180Q86V85 440 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 DCUN1D3Q8IWE4 304 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 CTAGE4Q8IX94 777 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 TAGAPQ8N103 731 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 EMC1Q8N766 993 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 LMNTD1Q8N9Z9 388 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 PRPF31Q8WWY3 499 aaKnown RBP4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 DNAAF4Q8WXU2 420 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 SORCS1Q8WY21 1168 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 WBP2Q969T9 261 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 CSTL1Q9H114 145 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 UBTD1Q9HAC8 227 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ANKEF1Q9NU02 776 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 PSD3Q9NYI0 1048 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 RCC2Q9P258 522 aaKnown RBP4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 VDAC3Q9Y277 283 aa4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ASTN2O75129 1339 aaPredicted RBP4.7□□□□□ -1.66
RAB3GAP1-202ENST00000425393 IGHV4OR15-8A0A075B7B6 117 aa4.69□□□□□ -1.66
RAB3GAP1-202ENST00000425393 LOC102723996A0A087X1L8 192 aa4.69□□□□□ -1.66
RAB3GAP1-202ENST00000425393 A0A0G2JPF8 293 aa4.69□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ZCWPW2A0A1B0GU75 182 aa4.69□□□□□ -1.66
RAB3GAP1-202ENST00000425393 HNRNPCL3B7ZW38 293 aa4.69□□□□□ -1.66
RAB3GAP1-202ENST00000425393 ADAM20O43506 726 aa4.69□□□□□ -1.66
RAB3GAP1-202ENST00000425393 LMX1BO60663 402 aa4.69□□□□□ -1.66
RAB3GAP1-202ENST00000425393 HNRNPCL4P0DMR1 293 aa4.69□□□□□ -1.66
RAB3GAP1-202ENST00000425393 CTSCP53634 463 aa4.69□□□□□ -1.66
RAB3GAP1-202ENST00000425393 GAGE2BQ13066 116 aa4.69□□□□□ -1.66
RAB3GAP1-202ENST00000425393 TOMM20Q15388 145 aa4.69□□□□□ -1.66
RAB3GAP1-202ENST00000425393 C15orf59Q2T9L4 293 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms