RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 CHFRQ96EP1 664 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 LATS2Q9NRM7 1088 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 SMOXQ9NWM0 555 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 PPM1HQ9ULR3 514 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 TMCO1Q9UM00 188 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 SKAP2O75563 359 aaPredicted RBP26.16■■□□□ 1.78
LDB1-202ENST00000425280 CDK14O94921 469 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 RPS17P08708 135 aaKnown RBP26.16■■□□□ 1.78
LDB1-202ENST00000425280 DGKAP23743 735 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 RGS4P49798 205 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 ACSBG2Q5FVE4 666 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 ERAP2Q6P179 960 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 TXNDC11Q6PKC3 985 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 PARM1Q6UWI2 310 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 KIRREL3Q8IZU9 778 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 TEX9Q8N6V9 391 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 C1QTNF3Q9BXJ4 246 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 CADM1Q9BY67 442 aaKnown RBP26.16■■□□□ 1.78
LDB1-202ENST00000425280 CD274Q9NZQ7 290 aa26.16■■□□□ 1.78
LDB1-202ENST00000425280 NFKBIL1Q9UBC1 381 aaPredicted RBP26.16■■□□□ 1.78
LDB1-202ENST00000425280 SPECC1L-ADORA2AF8WAN1 911 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 GYG2O15488 501 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 AGTR2P50052 363 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 GRIN2CQ14957 1233 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 TGFBIQ15582 683 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 FAM219BQ5XKK7 198 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 NXNQ6DKJ4 435 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 CLEC6AQ6EIG7 209 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 CES5AQ6NT32 575 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 SBSNQ6UWP8 590 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 TECPR1Q7Z6L1 1165 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 ADAMTSL2Q86TH1 951 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 PACS2Q86VP3 889 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 PIP4K2CQ8TBX8 421 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 DTX3LQ8TDB6 740 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 ELSPBP1Q96BH3 223 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 RAD18Q9NS91 495 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 ITM2BQ9Y287 266 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 B2RBV5 119 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 LAMP2P13473 410 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 DLX2Q07687 328 aaPredicted RBP26.15■■□□□ 1.78
LDB1-202ENST00000425280 ANKS6Q68DC2 871 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 SERPINA13PQ6UXR4 307 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 LIPIQ6XZB0 460 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 MYO1HQ8N1T3 1032 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 FBXO27Q8NI29 283 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 TRPC4APQ8TEL6 797 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 FGF14Q92915 247 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 ARRDC3Q96B67 414 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 FAM129BQ96TA1 746 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 RIOK2Q9BVS4 552 aaKnown RBP26.15■■□□□ 1.78
LDB1-202ENST00000425280 MEAF6Q9HAF1 191 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.15■■□□□ 1.78
LDB1-202ENST00000425280 UTP6Q9NYH9 597 aaKnown RBP26.15■■□□□ 1.78
LDB1-202ENST00000425280 NUDT4Q9NZJ9 180 aa26.15■■□□□ 1.78
LDB1-202ENST00000425280 ANTXRLA6NF34 631 aa26.14■■□□□ 1.77
LDB1-202ENST00000425280 SNX2O60749 519 aa26.14■■□□□ 1.77
LDB1-202ENST00000425280 ITGB7P26010 798 aa26.14■■□□□ 1.77
LDB1-202ENST00000425280 SATB1Q01826 763 aa26.14■■□□□ 1.77
LDB1-202ENST00000425280 CLCQ05315 142 aa26.14■■□□□ 1.77
LDB1-202ENST00000425280 ELAVL3Q14576 367 aaKnown RBP26.14■■□□□ 1.77
LDB1-202ENST00000425280 HENMT1Q5T8I9 393 aaKnown RBP26.14■■□□□ 1.77
LDB1-202ENST00000425280 UCMAQ8WVF2 138 aa26.14■■□□□ 1.77
LDB1-202ENST00000425280 PANX3Q96QZ0 392 aa26.14■■□□□ 1.77
LDB1-202ENST00000425280 MID1IP1Q9NPA3 183 aa26.14■■□□□ 1.77
LDB1-202ENST00000425280 MBD1Q9UIS9 605 aaPredicted RBP26.14■■□□□ 1.77
LDB1-202ENST00000425280 HCN2Q9UL51 889 aa26.14■■□□□ 1.77
LDB1-202ENST00000425280 RGSL1A5PLK6 1076 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 GSC2O15499 205 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 SPINT1O43278 529 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 KLF10Q13118 480 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 TTC31Q49AM3 519 aaPredicted RBP26.13■■□□□ 1.77
LDB1-202ENST00000425280 TRAM1L1Q8N609 369 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 ZNF483Q8TF39 744 aaPredicted RBP26.13■■□□□ 1.77
LDB1-202ENST00000425280 ZNF385DQ9H6B1 395 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 ANKRD12Q6UB98 2062 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 A8MUI8 341 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 MAGEC1O60732 1142 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 TBX10O75333 385 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 FGF4P08620 206 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 ELFN1P0C7U0 828 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 GDI1P31150 447 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 INHBCP55103 352 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 LCP2Q13094 533 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 PPP1R3AQ16821 1122 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 UGT3A2Q3SY77 523 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 TMEM198Q66K66 360 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 FRA10AC1Q70Z53 315 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 CLYBLQ8N0X4 340 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 POU5F2Q8N7G0 328 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 RPP25Q9BUL9 199 aaKnown RBP26.13■■□□□ 1.77
LDB1-202ENST00000425280 KCTD5Q9NXV2 234 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 KLHL42Q9P2K6 505 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 PCTPQ9UKL6 214 aa26.13■■□□□ 1.77
LDB1-202ENST00000425280 KAT7O95251 611 aa26.12■■□□□ 1.77
LDB1-202ENST00000425280 OR56A5P0C7T3 313 aa26.12■■□□□ 1.77
LDB1-202ENST00000425280 GM2AP17900 193 aa26.12■■□□□ 1.77
LDB1-202ENST00000425280 IL12RB1P42701 662 aa26.12■■□□□ 1.77
LDB1-202ENST00000425280 NAA25Q14CX7 972 aa26.12■■□□□ 1.77
LDB1-202ENST00000425280 CYHR1Q6ZMK1 362 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms