RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 FAM170AA1A519 330 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 NKX2-6A6NCS4 301 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 TRIM49BA6NDI0 452 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 TMEM150CB9EJG8 249 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 I6L893 689 aaPredicted RBP6.17□□□□□ -1.42
SDCBP-203ENST00000424270 AGPSO00116 658 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 PROM1O43490 865 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 PRAMEF2O60811 474 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 PALMO75781 387 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 HEXIM1O94992 359 aaKnown RBP6.17□□□□□ -1.42
SDCBP-203ENST00000424270 LCA5LO95447 670 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 ZBTB11O95625 1053 aaPredicted RBP6.17□□□□□ -1.42
SDCBP-203ENST00000424270 F10P00742 488 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 IFNA2P01563 188 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 PYGLP06737 847 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 CD63P08962 238 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 GM2AP17900 193 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 XRCC1P18887 633 aaPredicted RBP6.17□□□□□ -1.42
SDCBP-203ENST00000424270 HALP42357 657 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 SCNN1BP51168 640 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 UBE2IP63279 158 aaKnown RBP6.17□□□□□ -1.42
SDCBP-203ENST00000424270 SLC39A14Q15043 492 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 CYTH1Q15438 398 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 ZFYVE27Q5T4F4 411 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 FAM102AQ5T9C2 384 aaPredicted RBP6.17□□□□□ -1.42
SDCBP-203ENST00000424270 C1orf189Q5VU69 101 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 HMBOX1Q6NT76 420 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 CRTC3Q6UUV7 619 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 ADAMTSL4Q6UY14 1074 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 ARMC2Q8NEN0 867 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 EXD1Q8NHP7 514 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 CCDC110Q8TBZ0 833 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 ADAMTS18Q8TE60 1221 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 VOPP1Q96AW1 172 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 PTERQ96BW5 349 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 ZNF501Q96CX3 271 aaPredicted RBP6.17□□□□□ -1.42
SDCBP-203ENST00000424270 VPS50Q96JG6 964 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 TAAR6Q96RI8 345 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 CPXM1Q96SM3 734 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 NPY6RQ99463 290 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 DPH2Q9BQC3 489 aaPredicted RBP6.17□□□□□ -1.42
SDCBP-203ENST00000424270 TRIM56Q9BRZ2 755 aaKnown RBP6.17□□□□□ -1.42
SDCBP-203ENST00000424270 LHPPQ9H008 270 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 NEUROD4Q9HD90 331 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 KCNJ16Q9NPI9 418 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 POT1Q9NUX5 634 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 PCMTD2Q9NV79 361 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 TMEM51Q9NW97 253 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 TMEM248Q9NWD8 314 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 LRFN1Q9P244 771 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 ZNF212Q9UDV6 495 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 SERTAD3Q9UJW9 196 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 FHOD1Q9Y613 1164 aa6.17□□□□□ -1.42
SDCBP-203ENST00000424270 FBN1P35555 2871 aaKnown RBP6.17□□□□□ -1.42
SDCBP-203ENST00000424270 COL6A5A8TX70 2615 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 OR52A4PA6NMU1 304 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 E7EQ34 232 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 CUTAO60888 179 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 ERBB2P04626 1255 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 HBQ1P09105 142 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 UNGP13051 313 aaPredicted RBP6.16□□□□□ -1.42
SDCBP-203ENST00000424270 MST1P26927 711 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 RPL10P27635 214 aaKnown RBP6.16□□□□□ -1.42
SDCBP-203ENST00000424270 TEAD1P28347 426 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 SLC19A1P41440 591 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 PREPP48147 710 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 DRG2P55039 364 aaKnown RBP6.16□□□□□ -1.42
SDCBP-203ENST00000424270 SOX8P57073 446 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 ATP11AP98196 1134 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 NRG1Q02297 640 aaPredicted RBP6.16□□□□□ -1.42
SDCBP-203ENST00000424270 ABRQ12979 859 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 MFAP5Q13361 173 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 SYCP1Q15431 976 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 CDO1Q16878 200 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 SLC25A52Q3SY17 297 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 OTUD1Q5VV17 481 aaPredicted RBP6.16□□□□□ -1.42
SDCBP-203ENST00000424270 ZNF324BQ6AW86 544 aaPredicted RBP6.16□□□□□ -1.42
SDCBP-203ENST00000424270 OLFML1Q6UWY5 402 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 TRIM72Q6ZMU5 477 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 CEP128Q6ZU80 1094 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 USP45Q70EL2 814 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 SLC26A9Q7LBE3 791 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 PPP1R32Q7Z5V6 425 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 SPPL2CQ8IUH8 684 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 RBM12BQ8IXT5 1001 aaKnown RBP6.16□□□□□ -1.42
SDCBP-203ENST00000424270 ZZZ3Q8IYH5 903 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 GPR135Q8IZ08 494 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 CLYBLQ8N0X4 340 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 NDUFAF2Q8N183 169 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 C1orf131Q8NDD1 294 aaKnown RBP6.16□□□□□ -1.42
SDCBP-203ENST00000424270 SIMC1Q8NDZ2 872 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 AGAP11Q8TF27 550 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 ZNF606Q8WXB4 792 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 SCAMP4Q969E2 229 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 GPATCH1Q9BRR8 931 aaKnown RBP6.16□□□□□ -1.42
SDCBP-203ENST00000424270 KLC2Q9H0B6 622 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 METTL14Q9HCE5 456 aaKnown RBP6.16□□□□□ -1.42
SDCBP-203ENST00000424270 SLC6A20Q9NP91 592 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 TXLNGQ9NUQ3 528 aa6.16□□□□□ -1.42
SDCBP-203ENST00000424270 PLA2G3Q9NZ20 509 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms