RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SLC2A4P14672 509 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 ETS1P14921 441 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 XRCC1P18887 633 aaPredicted RBP17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 MPSTP25325 297 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 GPLD1P80108 840 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 TMPRSS15P98073 1019 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 SNX1Q13596 522 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 SEPT7Q16181 437 aaKnown RBP17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 TMEM220Q6QAJ8 160 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 ABRAXAS1Q6UWZ7 409 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 LRRC69Q6ZNQ3 347 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 FAM83HQ6ZRV2 1179 aaPredicted RBP17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 SLC9B2Q86UD5 537 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 OR4D9Q8NGE8 314 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 SLC38A3Q99624 504 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 C19orf43Q9BQ61 176 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 TBC1D10AQ9BXI6 508 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 GRPEL1Q9HAV7 217 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 ETNK1Q9HBU6 452 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 FEZ2Q9UHY8 353 aaPredicted RBP17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 WDR37Q9Y2I8 494 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 SSUH2Q9Y2M2 353 aa17.54■□□□□ 0.4
SBDSP1-202ENST00000423945 MGAQ8IWI9 3026 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 OR2AG2A6NM03 316 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 CCL4P13236 92 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 RPL10P27635 214 aaKnown RBP17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 SLC5A2P31639 672 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 STIP1P31948 543 aaKnown RBP17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 CDKN1CP49918 316 aaPredicted RBP17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 DRG2P55039 364 aaKnown RBP17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 DMPKQ09013 629 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 GTF2H3Q13889 308 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 WASH2PQ6VEQ5 465 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 BEND7Q8N7W2 519 aaPredicted RBP17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 DNAJC1Q96KC8 554 aaKnown RBP17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 ALS2CR12Q96Q35 445 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 FRMD8P1Q9BZ68 369 aaPredicted RBP17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 PRORYQ9H606 182 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 ASB8Q9H765 288 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 WASH6PQ9NQA3 447 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 OGFRQ9NZT2 677 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 PDP2Q9P2J9 529 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 PCDHGA7Q9Y5G6 932 aa17.53■□□□□ 0.4
SBDSP1-202ENST00000423945 LILRA5A6NI73 299 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 OR52A4PA6NMU1 304 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 PDZK1P1A8MUH7 402 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 ZW10O43264 779 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 POP7O75817 140 aaKnown RBP17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 PRSS56P0CW18 603 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 GRIA1P42261 906 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 PDE1BQ01064 536 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 CLCA4Q14CN2 919 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 AGAP9Q5VTM2 703 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 TMEM71Q6P5X7 295 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 DET1Q7L5Y6 550 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 TRIM58Q8NG06 486 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 OR52K1Q8NGK4 314 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 KCNE4Q8WWG9 221 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 TMEM159Q96B96 161 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 SGF29Q96ES7 293 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 TTC25Q96NG3 672 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 ZCCHC2Q9C0B9 1178 aaKnown RBP17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 FAM96AQ9H5X1 160 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 ZNF148Q9UQR1 794 aa17.52■□□□□ 0.4
SBDSP1-202ENST00000423945 PIKFYVEQ9Y2I7 2098 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 TRBV5-4A0A0C4DH59 114 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 C9orf172C9J069 976 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 H7C0S8 307 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 HGSO14964 777 aaPredicted RBP17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 PSMD3O43242 534 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 DUX1O43812 170 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 IFNB1P01574 187 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 JMJD7P0C870 316 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 ZSCAN5DPP0CG00 497 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 FGF3P11487 239 aaPredicted RBP17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 MSH3P20585 1137 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 IDSP22304 550 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 PSMA3P25788 255 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 ARSDP51689 593 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 EPHA4P54764 986 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 CLN3Q13286 438 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 TRA2AQ13595 282 aaKnown RBP eCLIP17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 NFE2L1Q14494 772 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 POU6F1Q14863 301 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 CCNG2Q16589 344 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 SDK2Q58EX2 2172 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 FNBP1LQ5T0N5 605 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 TMEM26Q6ZUK4 368 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 SNX20Q7Z614 316 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 AMZ2Q86W34 360 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 NXPE1Q8N323 547 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 OR10G6Q8NH81 332 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 PMEPA1Q969W9 287 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 SH3KBP1Q96B97 665 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 CMKLR1Q99788 373 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 DPYSL5Q9BPU6 564 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 STN1Q9H668 368 aaKnown RBP17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 UCK1Q9HA47 277 aa17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 NLE1Q9NVX2 485 aaPredicted RBP17.51■□□□□ 0.39
SBDSP1-202ENST00000423945 FOXJ2Q9P0K8 574 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms