RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 PRAMEF1O95521 474 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 ANKRD34CP0C6C1 535 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 SFTPCP11686 197 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 ITIH1P19827 911 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 ITGALP20701 1170 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 PSMB4P28070 264 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 NDUFS1P28331 727 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 AKT1P31749 480 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 UBE2IP63279 158 aaKnown RBP8.51□□□□□ -1.05
MDC1-204ENST00000422266 C19orf57Q0VDD7 668 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 NFATC2Q13469 925 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 CHRNA6Q15825 494 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 GPR33Q49SQ1 333 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 SOWAHCQ53LP3 525 aaPredicted RBP8.51□□□□□ -1.05
MDC1-204ENST00000422266 ARHGAP40Q5TG30 622 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 CRTC3Q6UUV7 619 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 FAM151BQ6UXP7 276 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 TMEM26Q6ZUK4 368 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 B4GALNT4Q76KP1 1039 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 FAM129CQ86XR2 697 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 ZNF398Q8TD17 642 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 PTCD2Q8WV60 388 aaKnown RBP8.51□□□□□ -1.05
MDC1-204ENST00000422266 MAIP1Q8WWC4 291 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 SLC39A7Q92504 469 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 TBL1YQ9BQ87 522 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 CCM2Q9BSQ5 444 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 RAB33BQ9H082 229 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 PRDM8Q9NQV8 689 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 FBXO8Q9NRD0 319 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 SLC39A1Q9NY26 324 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 CRLS1Q9UJA2 301 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 TFR2Q9UP52 801 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 REXO2Q9Y3B8 237 aaKnown RBP8.51□□□□□ -1.05
MDC1-204ENST00000422266 PLEKHM1Q9Y4G2 1056 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 SPO11Q9Y5K1 396 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 HEBP2Q9Y5Z4 205 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 SLC30A1Q9Y6M5 507 aa8.51□□□□□ -1.05
MDC1-204ENST00000422266 ZFC3H1O60293 1989 aaKnown RBP8.5□□□□□ -1.05
MDC1-204ENST00000422266 AHCTF1Q8WYP5 2266 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 DSPP15924 2871 aaKnown RBP8.5□□□□□ -1.05
MDC1-204ENST00000422266 TRBV23OR9-2A0A075B6M9 112 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 C17orf113A0A1B0GUU1 675 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 AP3B1O00203 1094 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 AURKAO14965 403 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 SRP72O76094 671 aaKnown RBP8.5□□□□□ -1.05
MDC1-204ENST00000422266 AGTP01019 485 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 ITGB2P05107 769 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 HGFP14210 728 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 ADRA1AP35348 466 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 PPARGP37231 505 aaPredicted RBP8.5□□□□□ -1.05
MDC1-204ENST00000422266 CHRNA4P43681 627 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 C16orf72Q14CZ0 275 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 SKIDA1Q1XH10 827 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 GPRC6AQ5T6X5 926 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 NKAIN2Q5VXU1 208 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 TMEM220Q6QAJ8 160 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 C4orf22Q6V702 233 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 ZNF574Q6ZN55 896 aaPredicted RBP8.5□□□□□ -1.05
MDC1-204ENST00000422266 TMPRSS9Q7Z410 1059 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 ARHGAP22Q7Z5H3 698 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 SNX20Q7Z614 316 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 BPHLQ86WA6 291 aaPredicted RBP8.5□□□□□ -1.05
MDC1-204ENST00000422266 DTX1Q86Y01 620 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 TMEM139Q8IV31 216 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 SFTPA2Q8IWL1 248 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 KLHDC8BQ8IXV7 354 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 COL27A1Q8IZC6 1860 aaPredicted RBP8.5□□□□□ -1.05
MDC1-204ENST00000422266 CARFQ8N187 725 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 IL22RA1Q8N6P7 574 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 SPC24Q8NBT2 197 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 RCBTB1Q8NDN9 531 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 OR4K2Q8NGD2 314 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 STYXQ8WUJ0 223 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 ALG3Q92685 438 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 ART4Q93070 314 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.5□□□□□ -1.051e-6■■■■■ 31.4
MDC1-204ENST00000422266 KIAA1143Q96AT1 154 aaPredicted RBP8.5□□□□□ -1.05
MDC1-204ENST00000422266 SGF29Q96ES7 293 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 HES6Q96HZ4 224 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 LINC00615Q96LM1 132 aaPredicted RBP8.5□□□□□ -1.05
MDC1-204ENST00000422266 ASB8Q9H765 288 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 CPNE5Q9HCH3 593 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 SLC40A1Q9NP59 571 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 ARFGAP3Q9NP61 516 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 WDR70Q9NW82 654 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 EPHA6Q9UF33 1036 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 DNAJC16Q9Y2G8 782 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 ARL5AQ9Y689 179 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 COLEC10Q9Y6Z7 277 aa8.5□□□□□ -1.05
MDC1-204ENST00000422266 MN1Q10571 1320 aaPredicted RBP8.5□□□□□ -1.05
MDC1-204ENST00000422266 MGAT4DA6NG13 374 aa8.49□□□□□ -1.05
MDC1-204ENST00000422266 PRR19A6NJB7 356 aa8.49□□□□□ -1.05
MDC1-204ENST00000422266 EFCAB7A8K855 629 aa8.49□□□□□ -1.05
MDC1-204ENST00000422266 AGAP14A8MT82 685 aa8.49□□□□□ -1.05
MDC1-204ENST00000422266 C9orf172C9J069 976 aa8.49□□□□□ -1.05
MDC1-204ENST00000422266 E7EVH7 732 aa8.49□□□□□ -1.05
MDC1-204ENST00000422266 H7C0S8 307 aa8.49□□□□□ -1.05
MDC1-204ENST00000422266 MATN2O00339 956 aa8.49□□□□□ -1.05
MDC1-204ENST00000422266 POLR1CO15160 346 aaPredicted RBP8.49□□□□□ -1.05
MDC1-204ENST00000422266 UGT1A9O60656 530 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms