RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 TBC1D3Q8IZP1 549 aaPredicted RBP5□□□□□ -1.61
SFXN1-202ENST00000421887 SLC25A45Q8N413 288 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 MYCT1Q8N699 235 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 OR6B3Q8NGW1 331 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 NOC3LQ8WTT2 800 aaKnown RBP5□□□□□ -1.61
SFXN1-202ENST00000421887 CASKIN2Q8WXE0 1202 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 POMGNT1Q8WZA1 660 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 ARRDC3Q96B67 414 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 PRR11Q96HE9 360 aaPredicted RBP5□□□□□ -1.61
SFXN1-202ENST00000421887 CDK5RAP3Q96JB5 506 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 MED10Q9BTT4 135 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 SLC2A11Q9BYW1 496 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 SLC13A1Q9BZW2 595 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 ZHX3Q9H4I2 956 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 FBXO44Q9H4M3 255 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 ZNF71Q9NQZ8 489 aaPredicted RBP5□□□□□ -1.61
SFXN1-202ENST00000421887 NLGN3Q9NZ94 848 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 TUBD1Q9UJT1 453 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 PNMA8BQ9ULN7 279 aaPredicted RBP5□□□□□ -1.61
SFXN1-202ENST00000421887 FZD4Q9ULV1 537 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 CDYLQ9Y232 598 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 MRFAP1Q9Y605 127 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 CYP46A1Q9Y6A2 500 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 FLNCQ14315 2725 aa5□□□□□ -1.61
SFXN1-202ENST00000421887 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.99□□□□□ -1.61
SFXN1-202ENST00000421887 A0A1W2PR77 199 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 RTN2O75298 545 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 PENKP01210 267 aaPredicted RBP4.99□□□□□ -1.61
SFXN1-202ENST00000421887 PIGRP01833 764 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 NUDT1P36639 197 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 GNL1P36915 607 aaPredicted RBP4.99□□□□□ -1.61
SFXN1-202ENST00000421887 DCTP40126 519 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 CCR5P51681 352 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 SLC5A3P53794 718 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 ST8SIA6P61647 398 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 ZNF177Q13360 481 aaPredicted RBP4.99□□□□□ -1.61
SFXN1-202ENST00000421887 ORC2Q13416 577 aaPredicted RBP4.99□□□□□ -1.61
SFXN1-202ENST00000421887 PDCD1Q15116 288 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 CDKN3Q16667 212 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.99□□□□□ -1.61
SFXN1-202ENST00000421887 C10orf120Q5SQS8 335 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 PGM2L1Q6PCE3 622 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 RAB11FIP2Q7L804 512 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 TICAM1Q8IUC6 712 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 CBARPQ8N350 705 aaPredicted RBP4.99□□□□□ -1.61
SFXN1-202ENST00000421887 FBXO39Q8N4B4 442 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 SCAMP5Q8TAC9 235 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 C9orf43Q8TAL5 461 aaPredicted RBP4.99□□□□□ -1.61
SFXN1-202ENST00000421887 WBP2Q969T9 261 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 HPDLQ96IR7 371 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 ANKRD36BP1Q96IX9 119 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 PIWIL1Q96J94 861 aaKnown RBP4.99□□□□□ -1.61
SFXN1-202ENST00000421887 KCNK16Q96T55 309 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 TLR10Q9BXR5 811 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 STRADBQ9C0K7 418 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 NEUROG2Q9H2A3 272 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 TMEM245Q9H330 911 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 PABPC3Q9H361 631 aaKnown RBP4.99□□□□□ -1.61
SFXN1-202ENST00000421887 EBF2Q9HAK2 575 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 DMAP1Q9NPF5 467 aaPredicted RBP4.99□□□□□ -1.61
SFXN1-202ENST00000421887 PRSS16Q9NQE7 514 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 KLC4Q9NSK0 619 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 COMMD8Q9NX08 183 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 MKS1Q9NXB0 559 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 PCDHGA7Q9Y5G6 932 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 ITPR3Q14573 2671 aa4.99□□□□□ -1.61
SFXN1-202ENST00000421887 UBE4BO95155 1302 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 TLN1Q9Y490 2541 aaKnown RBP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 RP1P56715 2156 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 A8MXQ7 604 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 TMX2-CTNND1H3BSU7 103 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 TBCAO75347 108 aaKnown RBP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 DDAH2O95865 285 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 TBX18O95935 607 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 TNNC2P02585 160 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 TUBB4AP04350 444 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 KRT7P08729 469 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 NHLRC4P0CG21 123 aaPredicted RBP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 POLR2EP19388 210 aaKnown RBP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 TRIM21P19474 475 aaKnown RBP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 WARSP23381 471 aaKnown RBP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 MAT2AP31153 395 aaKnown RBP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 ARHGAP25P42331 645 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 TNNC1P63316 161 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 COG7P83436 770 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 KLRB1Q12918 225 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 SRSF6Q13247 344 aaKnown RBP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 DYRK1AQ13627 763 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 KCNJ12Q14500 433 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 PCBP2Q15366 365 aaKnown RBP eCLIP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 ZRSR2Q15696 482 aaKnown RBP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 CST6Q15828 149 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 POM121L1PQ3SYA9 428 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 SETMARQ53H47 684 aaPredicted RBP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 PRAMEF17Q5VTA0 474 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 CRTC1Q6UUV9 634 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 CHST9Q7L1S5 443 aa4.98□□□□□ -1.61
SFXN1-202ENST00000421887 MEPCEQ7L2J0 689 aaKnown RBP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 EFL1Q7Z2Z2 1120 aaKnown RBP4.98□□□□□ -1.61
SFXN1-202ENST00000421887 VASH2Q86V25 355 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms