RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 SLC35G1Q2M3R5 365 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 C9orf64Q5T6V5 341 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 PACS1Q6VY07 963 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 CAMK1DQ8IU85 385 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 MCEMP1Q8IX19 187 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 RASGEF1CQ8N431 466 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 PANX1Q96RD7 426 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 KCNK4Q9NYG8 393 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 TK2O00142 265 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 KRT8P05787 483 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 FAM153BP0C7A2 387 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 ITPKBP27987 946 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 NTSR1P30989 418 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 IRAK1P51617 712 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 MAPK12P53778 367 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 SLC1A5Q15758 541 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 FAM153CQ494X1 144 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 RNF44Q7L0R7 432 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 IFNLR1Q8IU57 520 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-206ENST00000421141 AZIN2Q96A70 460 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 FCRL5Q96RD9 977 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 ADAMTS7Q9UKP4 1686 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 KNTC1P50748 2209 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 TDRD6O60522 2096 aaKnown RBP10.63□□□□□ -0.71
PTCH1-206ENST00000421141 ZNF840PA6NDX5 716 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 SNAP91O60641 907 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 HOXC12P31275 282 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 ZNF33AQ06730 810 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 GTF2H2Q13888 395 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 EIF4HQ15056 248 aaKnown RBP10.63□□□□□ -0.71
PTCH1-206ENST00000421141 GTF2H2CQ6P1K8 395 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 DEFB107AQ8IZN7 70 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 Q8N9G6 341 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-206ENST00000421141 SDCBP2Q9H190 292 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 XPR1Q9UBH6 696 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 FKBPLQ9UIM3 349 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 CDH7Q9ULB5 785 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 ERVK-11Q9UQG0 969 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 SLC9A8Q9Y2E8 581 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 TRPM6Q9BX84 2022 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 AZIN1O14977 448 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 DCXO43602 365 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 RPL26P61254 145 aaKnown RBP10.63□□□□□ -0.71
PTCH1-206ENST00000421141 MRPS15P82914 257 aaKnown RBP10.63□□□□□ -0.71
PTCH1-206ENST00000421141 ITM2CQ9NQX7 267 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 SIX4Q9UIU6 781 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 SERTAD3Q9UJW9 196 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 RPL26L1Q9UNX3 145 aaKnown RBP10.63□□□□□ -0.71
PTCH1-206ENST00000421141 SLC28A2O43868 658 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 LINC00032P0C843 101 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 PPIBP23284 216 aaKnown RBP10.63□□□□□ -0.71
PTCH1-206ENST00000421141 PBX1P40424 430 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 RAD23AP54725 363 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 MPP1Q00013 466 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 TSEN2Q8NCE0 465 aaKnown RBP10.63□□□□□ -0.71
PTCH1-206ENST00000421141 HCAR2Q8TDS4 363 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 BTBD9Q96Q07 612 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 ANKZF1Q9H8Y5 726 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 OSER1Q9NX31 292 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 SCML1Q9UN30 329 aa10.63□□□□□ -0.71
PTCH1-206ENST00000421141 SLC7A4O43246 635 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 PRKCGP05129 697 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 FASP25445 335 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 PIK3R1P27986 724 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 BLVRAP53004 296 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 SMIM11AP58511 58 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 DUPD1Q68J44 220 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 LDB1Q86U70 411 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 SIX5Q8N196 739 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 ANKRD49Q8WVL7 239 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 OLFM3Q96PB7 478 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 RSPH9Q9H1X1 276 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 HAO1Q9UJM8 370 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 TMEM150CB9EJG8 249 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 RFXANKO14593 260 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 LRATO95237 230 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 KAT7O95251 611 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 ATP1B2P14415 290 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 NMBRP28336 390 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 S100A5P33763 92 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 SIRPB2Q5JXA9 342 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 HFE2Q6ZVN8 426 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 PLEKHM3Q6ZWE6 761 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 VN1R5Q7Z5H4 357 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 ADCY4Q8NFM4 1077 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 ITFG1Q8TB96 612 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 HDAC7Q8WUI4 952 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 NACC2Q96BF6 587 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 OXNAD1Q96HP4 312 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 RIOK2Q9BVS4 552 aaKnown RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 OGDHLQ9ULD0 1010 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 MCIDASD6RGH6 385 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 SCAMP1O15126 338 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 ALOX15BO15296 676 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 CYP11A1P05108 521 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 PCSK2P16519 638 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 ITGA2P17301 1181 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 SEC24CP53992 1094 aa10.62□□□□□ -0.71
PTCH1-206ENST00000421141 PSMD4P55036 377 aaKnown RBP10.62□□□□□ -0.71
PTCH1-206ENST00000421141 HNRNPH2P55795 449 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms