RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 C9orf64Q5T6V5 341 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 UBE2R2Q712K3 238 aaPredicted RBP7.32□□□□□ -1.24
BDNF-209ENST00000420794 CFAP206Q8IYR0 622 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 GPR26Q8NDV2 337 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 BTN2A2Q8WVV5 523 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 HIC2Q96JB3 615 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 MSLNLQ96KJ4 702 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 FAM210AQ96ND0 272 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 CENPKQ9BS16 269 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 HDAC8Q9BY41 377 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 OSBPL6Q9BZF3 934 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 ACTR8Q9H981 624 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 VTI1BQ9UEU0 232 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 PPM1HQ9ULR3 514 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 CDYLQ9Y232 598 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 ASF1AQ9Y294 204 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 DYRK1BQ9Y463 629 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 ZNF638Q14966 1978 aaKnown RBP7.32□□□□□ -1.24
BDNF-209ENST00000420794 MLYCDO95822 493 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 EGFP01133 1207 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 C8GP07360 202 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 F7P08709 466 aaPredicted RBP7.32□□□□□ -1.24
BDNF-209ENST00000420794 HNRNPLP14866 589 aaKnown RBP eCLIP7.32□□□□□ -1.24
BDNF-209ENST00000420794 SERPINB5P36952 375 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 CCNG1P51959 295 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 KIF19Q2TAC6 998 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 ZYG11AQ6WRX3 759 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 AMZ2Q86W34 360 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 TCAIMQ8N3R3 496 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 SMIM14Q96QK8 99 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 C19orf43Q9BQ61 176 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 CCM2Q9BSQ5 444 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 SHCBP1LQ9BZQ2 653 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 TXLNGQ9NUQ3 528 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 CHCHD3Q9NX63 227 aaKnown RBP7.32□□□□□ -1.24
BDNF-209ENST00000420794 MKS1Q9NXB0 559 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.32□□□□□ -1.24
BDNF-209ENST00000420794 ITM2BQ9Y287 266 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 DHRS7Q9Y394 339 aa7.32□□□□□ -1.24
BDNF-209ENST00000420794 CCDC189A1A4V9 331 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 NPEPPSL1A6NEC2 478 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 TRAFD1O14545 582 aaPredicted RBP7.31□□□□□ -1.24
BDNF-209ENST00000420794 OR1I1O60431 355 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 CD160O95971 181 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 ESRRAP11474 423 aaPredicted RBP7.31□□□□□ -1.24
BDNF-209ENST00000420794 USP39Q53GS9 565 aaKnown RBP7.31□□□□□ -1.24
BDNF-209ENST00000420794 TMEM215Q68D42 235 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 ARMC6Q6NXE6 501 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 LRRTM4Q86VH4 590 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 PHC3Q8NDX5 983 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 PIWIL2Q8TC59 973 aaKnown RBP7.31□□□□□ -1.24
BDNF-209ENST00000420794 LPGAT1Q92604 370 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 ARRDC3Q96B67 414 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 CNDP1Q96KN2 507 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 MCCC1Q96RQ3 725 aaPredicted RBP7.31□□□□□ -1.24
BDNF-209ENST00000420794 HGH1Q9BTY7 390 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 MECRQ9BV79 373 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 NUDT4Q9NZJ9 180 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 TDRKHQ9Y2W6 561 aaKnown RBP7.31□□□□□ -1.24
BDNF-209ENST00000420794 TSC2P49815 1807 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 SHROOM3Q8TF72 1996 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 TK2O00142 265 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 PLK4O00444 970 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 TYROBPO43914 113 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 VEGFDO43915 354 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 ATP5HO75947 161 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 MYO1DO94832 1006 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 CCNFP41002 786 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 P2RY2P41231 377 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 RPIAP49247 311 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 IRF9Q00978 393 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 KCNC3Q14003 757 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 LEXMQ3ZCV2 418 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 HSD11B1LQ7Z5J1 315 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 ADCK2Q7Z695 626 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 HORMAD1Q86X24 394 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 SIX5Q8N196 739 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 SYNPOQ8N3V7 929 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 FRS2Q8WU20 508 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 DTD2Q96FN9 168 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 MRGPRX3Q96LB0 322 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 ZBTB18Q99592 522 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 GORASP1Q9BQQ3 440 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 WDR83Q9BRX9 315 aaKnown RBP7.31□□□□□ -1.24
BDNF-209ENST00000420794 SLC17A9Q9BYT1 436 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 DERL2Q9GZP9 239 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 C12orf65Q9H3J6 166 aaKnown RBP7.31□□□□□ -1.24
BDNF-209ENST00000420794 TRIM39Q9HCM9 518 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 MID1IP1Q9NPA3 183 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 LTBP2Q14767 1821 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 A0A0U1RQS6 177 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 GRXCR2A6NFK2 248 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 EPB42P16452 691 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 ZNF37AP17032 561 aaPredicted RBP7.31□□□□□ -1.24
BDNF-209ENST00000420794 RPS3P23396 243 aaKnown RBP eCLIP7.31□□□□□ -1.24
BDNF-209ENST00000420794 MMP12P39900 470 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 RPL14P50914 215 aaKnown RBP7.31□□□□□ -1.24
BDNF-209ENST00000420794 AQP5P55064 265 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 ACVR1Q04771 509 aa7.31□□□□□ -1.24
BDNF-209ENST00000420794 ILF3Q12906 894 aaKnown RBP eCLIP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms