RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 DNAJC28Q9NX36 388 aa20.7■□□□□ 0.9
GPC1-202ENST00000420138 MATN2O00339 956 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 KLK8O60259 260 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 TRIM16O95361 564 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 T-ENOLP0DO92 83 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 RASSF2P50749 326 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 RPL14P50914 215 aaKnown RBP20.69■□□□□ 0.9
GPC1-202ENST00000420138 HK3P52790 923 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 ZBTB16Q05516 673 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 SNCBQ16143 134 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 KHDC1Q4VXA5 237 aaKnown RBP20.69■□□□□ 0.9
GPC1-202ENST00000420138 FBXL19Q6PCT2 694 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 FRMD7Q6ZUT3 714 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 PTGR2Q8N8N7 351 aaPredicted RBP20.69■□□□□ 0.9
GPC1-202ENST00000420138 AGR3Q8TD06 166 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 EXT2Q93063 718 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 P2RY13Q9BPV8 354 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 WRAP53Q9BUR4 548 aaKnown RBP20.69■□□□□ 0.9
GPC1-202ENST00000420138 NMUR2Q9GZQ4 415 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 STN1Q9H668 368 aaKnown RBP20.69■□□□□ 0.9
GPC1-202ENST00000420138 COG4Q9H9E3 785 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 TNFRSF12AQ9NP84 129 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 RAD18Q9NS91 495 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 RNF112Q9ULX5 631 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 CCDC189A1A4V9 331 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 GRID2O43424 1007 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 HNRNPCL1O60812 293 aaKnown RBP20.69■□□□□ 0.9
GPC1-202ENST00000420138 SMIM24O75264 130 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 WASP42768 502 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 HERVK_113P63132 956 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 PFKFB4Q16877 469 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 EPGNQ6UW88 154 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 PPP1R16AQ96I34 528 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 RAB3IPQ96QF0 476 aaPredicted RBP20.69■□□□□ 0.9
GPC1-202ENST00000420138 ERVK-6Q9BXR3 956 aa20.69■□□□□ 0.9
GPC1-202ENST00000420138 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.69■□□□□ 0.9
GPC1-202ENST00000420138 PLXNB3Q9ULL4 1909 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 LRRC14BA6NHZ5 514 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 UBFD1O14562 309 aaKnown RBP20.68■□□□□ 0.9
GPC1-202ENST00000420138 SGTAO43765 313 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 SIX3O95343 332 aaPredicted RBP20.68■□□□□ 0.9
GPC1-202ENST00000420138 KRT16P08779 473 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 TNFRSF4P43489 277 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 GALNT1Q10472 559 aaPredicted RBP20.68■□□□□ 0.9
GPC1-202ENST00000420138 RIPK1Q13546 671 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 C2orf27AQ580R0 203 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 ACSBG2Q5FVE4 666 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 CFAP157Q5JU67 520 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 ERN2Q76MJ5 926 aaKnown RBP20.68■□□□□ 0.9
GPC1-202ENST00000420138 RAVER1Q8IY67 606 aaKnown RBP20.68■□□□□ 0.9
GPC1-202ENST00000420138 NRSN1Q8IZ57 195 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 DTD2Q96FN9 168 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 ZSCAN5AQ9BUG6 496 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 HDAC8Q9BY41 377 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 SPATS2LQ9NUQ6 558 aaKnown RBP20.68■□□□□ 0.9
GPC1-202ENST00000420138 COL4A2P08572 1712 aa20.68■□□□□ 0.9
GPC1-202ENST00000420138 FCHO1O14526 889 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 WNT9AO14904 365 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 MTX2O75431 263 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 SNUPNO95149 360 aaKnown RBP20.67■□□□□ 0.9
GPC1-202ENST00000420138 P2RY2P41231 377 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 PSMD8P48556 350 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 CREB5Q02930 508 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 ELP6Q0PNE2 266 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 CAMK2GQ13555 558 aaPredicted RBP20.67■□□□□ 0.9
GPC1-202ENST00000420138 ACOX1Q15067 660 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 CYHR1Q6ZMK1 362 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 NUDT18Q6ZVK8 323 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 CYP2U1Q7Z449 544 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 DSG4Q86SJ6 1040 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 CHPFQ8IZ52 775 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 PELI3Q8N2H9 469 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 PLCD3Q8N3E9 789 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 ZBTB2Q8N680 514 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 ZNF513Q8N8E2 541 aaPredicted RBP20.67■□□□□ 0.9
GPC1-202ENST00000420138 DDHD1Q8NEL9 900 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 PHF7Q9BWX1 381 aaPredicted RBP20.67■□□□□ 0.9
GPC1-202ENST00000420138 LIMD1Q9UGP4 676 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 COQ6Q9Y2Z9 468 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 PLXNA2O75051 1894 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 C1QTNF3-AMACRE9PGA6 284 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 CBX6O95503 412 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 SOD1P00441 154 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 CCR7P32248 378 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 DRD3P35462 400 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 TMEM52BQ4KMG9 183 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 SLC9B1Q4ZJI4 515 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 PIP5KL1Q5T9C9 394 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 FAM91A1Q658Y4 838 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 SBSNQ6UWP8 590 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 SUGP1Q8IWZ8 645 aaKnown RBP20.67■□□□□ 0.9
GPC1-202ENST00000420138 BTN2A2Q8WVV5 523 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 AP2M1Q96CW1 435 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 SLC7A6OSQ96CW6 309 aaPredicted RBP20.67■□□□□ 0.9
GPC1-202ENST00000420138 VPS35Q96QK1 796 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 RSPH9Q9H1X1 276 aaPredicted RBP20.67■□□□□ 0.9
GPC1-202ENST00000420138 KCNK12Q9HB15 430 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 KLHL42Q9P2K6 505 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 LNPEPQ9UIQ6 1025 aa20.67■□□□□ 0.9
GPC1-202ENST00000420138 MYO10Q9HD67 2058 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms