RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 HMGB4Q8WW32 186 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 INPP5DQ92835 1189 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 ZBTB9Q96C00 473 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 HIC2Q96JB3 615 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 SLC13A1Q9BZW2 595 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 IQCGQ9H095 443 aaKnown RBP14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 NMRAL1Q9HBL8 299 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 IGSF5Q9NSI5 407 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 PSD3Q9NYI0 1048 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 WSB2Q9NYS7 404 aaPredicted RBP14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 MID2Q9UJV3 735 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 DMTF1Q9Y222 760 aa14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 FNDC3AQ9Y2H6 1198 aaKnown RBP14.08□□□□□ -0.16
SHMT1P1-201ENST00000419974 ZFHX2Q9C0A1 2572 aaPredicted RBP14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TBC1D3DA0A087WVF3 549 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TBC1D3IA0A087WXS9 549 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TBC1D3EA0A087X179 549 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TBC1D3KA0A087X1G2 549 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TBC1D3FA6NER0 549 aaPredicted RBP14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TBC1D3LB9A6J9 549 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 KLF11O14901 512 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 CHUKO15111 745 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 SPAG7O75391 227 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 SEMA4FO95754 770 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TSPAN12O95859 305 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 FTH1P02794 183 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 PROCP04070 461 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 RBP1P09455 135 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TBC1D3HP0C7X1 549 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 ENO3P13929 434 aaPredicted RBP14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 MSH3P20585 1137 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 ACSL1P33121 698 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 CDK3Q00526 305 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 IL9RQ01113 521 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 PDAP1Q13442 181 aaKnown RBP14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 ZNF658BQ4V348 819 aaPredicted RBP14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TBC1D3GQ6DHY5 549 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 PTRHD1Q6GMV3 140 aaKnown RBP14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 RAET1GQ6H3X3 334 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TBC1D3CQ6IPX1 549 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TMEM207Q6UWW9 146 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 NEK10Q6ZWH5 1172 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 C1orf210Q8IVY1 113 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TBC1D3Q8IZP1 549 aaPredicted RBP14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 PNPLA1Q8N8W4 532 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 CADM4Q8NFZ8 388 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 SCARF2Q96GP6 870 aaPredicted RBP14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TSNARE1Q96NA8 513 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 MRPL57Q9BQC6 102 aaKnown RBP14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 SELENOSQ9BQE4 189 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TFB2MQ9H5Q4 396 aaKnown RBP14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 RMI1Q9H9A7 625 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 FAM86C1Q9NVL1 165 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 TRMT6Q9UJA5 497 aaKnown RBP14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 EMCNQ9ULC0 261 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 COQ6Q9Y2Z9 468 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 HS3ST3A1Q9Y663 406 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 PRSS21Q9Y6M0 314 aa14.07□□□□□ -0.16
SHMT1P1-201ENST00000419974 E5RI56 91 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 K7ESM1 405 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 PHGDHO43175 533 aaKnown RBP14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 LILRB5O75023 590 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 PAK4O96013 591 aaPredicted RBP14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 DCNP07585 359 aaKnown RBP14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 F7P08709 466 aaPredicted RBP14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 CHRM3P20309 590 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 AOAHP28039 575 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 CD6P30203 668 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 CXCL12P48061 93 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 PRKAA2P54646 552 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 IL2P60568 153 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 PLOD1Q02809 727 aaPredicted RBP14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 MTAPQ13126 283 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 TTLL9Q3SXZ7 439 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 PLEKHS1Q5SXH7 462 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 KLC3Q6P597 504 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 PAQR3Q6TCH7 311 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 ADGRG6Q86SQ4 1221 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 ISCA2Q86U28 154 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 PLD6Q8N2A8 252 aaKnown RBP14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 PELI3Q8N2H9 469 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 CLDN19Q8N6F1 224 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 MDM1Q8TC05 714 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 CKAP2Q8WWK9 683 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 GPR21Q99679 349 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 CAPS2Q9BXY5 557 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 MRPL46Q9H2W6 279 aaKnown RBP14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 C2orf42Q9NWW7 574 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 TMEM216Q9P0N5 145 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 SIRPGQ9P1W8 387 aa14.06□□□□□ -0.16
SHMT1P1-201ENST00000419974 VPS13AQ96RL7 3174 aa14.05□□□□□ -0.16
SHMT1P1-201ENST00000419974 K7ESF4 209 aa14.05□□□□□ -0.16
SHMT1P1-201ENST00000419974 POLR3GO15318 223 aaPredicted RBP14.05□□□□□ -0.16
SHMT1P1-201ENST00000419974 NUAK1O60285 661 aa14.05□□□□□ -0.16
SHMT1P1-201ENST00000419974 KCNJ13O60928 360 aa14.05□□□□□ -0.16
SHMT1P1-201ENST00000419974 NIPSNAP2O75323 286 aa14.05□□□□□ -0.16
SHMT1P1-201ENST00000419974 GPC4O75487 556 aa14.05□□□□□ -0.16
SHMT1P1-201ENST00000419974 SLCO2B1O94956 709 aa14.05□□□□□ -0.16
SHMT1P1-201ENST00000419974 CCDC166P0CW27 439 aa14.05□□□□□ -0.16
SHMT1P1-201ENST00000419974 CD1DP15813 335 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms